Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8571g00002 ATGGCTTCAAGATTCTGGACCCAGGGTGGAAGTGATTCCGAGGAGGAGGAGAGTGATTACGACGAGGAGGTTGAAACCGTGGCGGGTGAATCTGCTAGTCAAGCAGTGACAAGCAGGTACCTGCAGGATAATGCAAGTGACAGTGATGACTCCGATGGCCAAAAGCGCGTTGTCCGGTCAGCAAAAGATAAACGTTTTGAGGAGATGGCTTCCACTGTTGATCAGATGAAGAATGCCATGAAGATCAATGACTGGGTGAGCTTGCAAGAGAGTTTTGACAAGATTAACAAACAGCTTGAGAAAGTCATGCGTATCACCGAGTCTCAGAAGGTCCCCAATCTTTACATCAAGGCACTTGTGATGTTGGAAGATTTCTTGGCTCAGGCTTTGGCTAACAAGGATGCCAAGAAGAAGATGAGTAAAGCAAAATCTGATTCGGAAGCTTCCCAATATGAAGATGAAAAGGCAGATGCTGGTGAAGGTCCTTGGGACCAAAAGCTTAGCAAGAAGGACAGGCTTTTGGATAGACAGTTCATGAAAGATCCTCGTGAGATCACGTGGGACACGGTTAACAAGAAGTTTAAAGAGGTTGTGGCTGCTAGGGGCAGGAAGGGTACCGGGAGGTTTGAACAGGTTGAGCAGCTCACTTTCTTAACAAAAGTTGCTAAGACACCTGCACAGAAGCTGGAAATTCTGTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAATGGGCATATGCCCATAAATGTATGGAAAAAATGTGTGCATAACATGCTGATCATTCTTGATATTCTAGTGCAGTACACAAACATAGTGGTTGATGATTCGGTGGAACCAGATGAGAATGAAACTCAGAAAGGTCCTGAACATAATGGACCAATTCGGGTTTGGGGTAACTTAGTTGCTTTCTTAGAAAGAATTGATGTTGAGTTTTTCAAGAGCCTGCAGTGCATAGATCCTCATACACGTGACTATGTTGAGAGACTTAGGGATGAGCCCATATTTCTGGTTCTTGCTCAGAATGTCCAGGAATATCTTGAAAGAGTTGGAAATTTCAAAGCTGCATCTAAGGTGGCCTTGAGGAGGGTTGAGCTCATTTACTACAAACCACAAGGGGTTTATGATGCTATGAGAAAATTGACCGAGTTGACAGAAGATGGAGATGGAGGGGAGGCAAGTGAGGAGTCGAAGGGTTTTGAGGAATCAAGAATTCCTACTGCATTTGTTGCTACCCCGGAGGTTGTGGCCCGGAAACCAACCTTCCCTGAGTATAGCAGGACCCTAATGGATGTATTGGTATCTTTGATATACAAACATGGAGATGAGCGAACTAAAGCACGTGCAATGCTCTGTGATATATATCAGCATGCCCTTCTTGATGAGTTCTCAATAGCCCGTGATCTGCTGCTTATGAGCCATTTGCAAGATAGTGTTCAACATATGGACATTTCAACACAGATACTTTTTAACAGGGCTATGTCACAGTTAGGTTTATGTGCTTTTCGGGTTGGATTGATATCTGAAGCACATGGCTGTCTGTCTGAACTTTACTCTGGTGGAAGGGTGAAGGAGTTGCTTGCCCAAGGCGTGTCACAAAGTCGTTATCACGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGACGACGGCAGATGCCGTATCATATGCACATCAATCTTGAGCTCCTGGAGGCAGTACATCTTGTATCTGCTATGCTGCTAGAAGTTCCCAATATGGCAGCCAACATTCATGATGGAAAACGCAAGGTAATGAGTAAGACTTTCCGCCGCTTGCTTGAGATCAGCGACAAACAAACATTCACTGGTCCACCGGAAAATGTCAGAGATCATGTTATGGCTGCCACAAGGGTTCTTAGCAAGGGAGACTTTCAGAAGGCTTATGACATTATTGTGTCTCTTGATGTATGGAAATTTGTGAGGAACAGAGACAGTGTGCTTGAAATGCTGAAGGACAAAATCAAGGAGGAGGCATTGAGGACATACCTCTTTACCTTCTCTTCATCTTATGAATCCTTGAGCCTGGATCAACTCACAAAATTTTTTGATCTCTCTGTTTCTCAAACTCATAGCATTGTGAGTAGGATGATGATCAATGAAGAGCTTCATGCAAGCTGGGACCAGCCATCTGGGTGCATTATTTTCCAAGATGTTGAGCACTCTAGGCTGCAGGCATTGGCATTCCAGTTGACAGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCAACAGAGGCAAGGGTAGGTGGTGGTGGTGGATTGGATCTGCCTCCAAGGCGGAGAGATGGGCAGGACTATGCTGCTGCCGCCGCCACTGCAGGTAGTGGAACAGCCTCTTCTGGTGGTAGGTGGCAGGAGCTGTCCCATTCTCAGGCAAGGCAAAGCGGTGGGCGTGCAGGGTATGGTAGTGGTGGTGGAAGGCCAATGGCATTAGGGCAAGCAGCTGGGAGGGGGTATTCAAGGGATAGAATGGGACGAGGAACAGGTGGTGGCTACCAGAGTGCACGATATCAAGATGCTTCATATGGAAGGACTGCTCAAGGGGGTTCAGCATTGAGGGGACCCCAGGGCGATGTATCTACTCGCATGTCGTGCCAACTGCACATATGTGAATGTTATACAGTAACGTATTCATTTTTGTCCACAAATACCAGGGTCAAAGCCGGTTTTGATAACTAA 2709 0.4592 MASRFWTQGGSDSEEEESDYDEEVETVAGESASQAVTSRYLQDNASDSDDSDGQKRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRITESQKVPNLYIKALVMLEDFLAQALANKDAKKKMSKAKSDSEASQYEDEKADAGEGPWDQKLSKKDRLLDRQFMKDPREITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVHNMLIILDILVQYTNIVVDDSVEPDENETQKGPEHNGPIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPIFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQGVYDAMRKLTELTEDGDGGEASEESKGFEESRIPTAFVATPEVVARKPTFPEYSRTLMDVLVSLIYKHGDERTKARAMLCDIYQHALLDEFSIARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMAANIHDGKRKVMSKTFRRLLEISDKQTFTGPPENVRDHVMAATRVLSKGDFQKAYDIIVSLDVWKFVRNRDSVLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLTKFFDLSVSQTHSIVSRMMINEELHASWDQPSGCIIFQDVEHSRLQALAFQLTEKLSILAESNERATEARVGGGGGLDLPPRRRDGQDYAAAAATAGSGTASSGGRWQELSHSQARQSGGRAGYGSGGGRPMALGQAAGRGYSRDRMGRGTGGGYQSARYQDASYGRTAQGGSALRGPQGDVSTRMSCQLHICECYTVTYSFLSTNTRVKAGFDN 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 751 845 - -
Mupr8571g00002 902 ProSiteProfiles PCI domain profile. 557 729 IPR000717 -
Mupr8571g00002 902 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 658 746 IPR000717 -
Mupr8571g00002 902 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 145 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr8571g00002 902 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 152 588 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr8571g00002 902 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 145 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 783 807 - -
Mupr8571g00002 902 Gene3D - 664 733 IPR036388 -
Mupr8571g00002 902 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 804 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 30 44 - -
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 45 60 - -
Mupr8571g00002 902 SUPERFAMILY "Winged helix" DNA-binding domain 654 728 IPR036390 -
Mupr8571g00002 902 Pfam PCI domain 597 725 IPR000717 -
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 12 26 - -
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 1 60 - -
Mupr8571g00002 902 MobiDBLite consensus disorder prediction 140 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8571g00002 Mupr-Chr8571 7423 11692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8571g00002 1 836 Eukaryotic Initiation Factors Gene Family AT3G56150 66.002 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8571g00002 K03252 - cave:132189294 1305.43