Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8560g00001 ATGACGACCGCATTTAAGCCACCGATTGGGTTGCGGTTCCTCCACCCACCACCGCTTTTCCCTCCTTCCATACCGTGCGTTTTTCCCTCTCACTCTCCTCAATTGCATTTTGCCGCTACACACGCTGAACTATATCCATTCAAGTTCCCAACCACTCAGCTTCCTAGAATCAACTGTAATTACTCCTCTTTTGAAGTACGCTCTTGTCAACTTACACTACCGCCTTTACTTTGCCATTATCCATCTCCATATGTGTGTTTGGTTTTACCGGACGAAGTATCAGAATTGATTTTGTCTCCTGTTAGAGACGTTAGCTATCAAGCCCCTGGGACTCAGCTTAGACTTCTAAATTCAGTTAGTTTTTCACTTCCAGAGAAAAGTTTTGGTCTAATATTTGGACAGAGTGGAAGCGGAAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCTGGGTCTATTTTCATCCAAAAATATGGGAATGATGGAAATCCTAGTCATCCGCCAGAGCCTTTGGTGCCTGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACCTTTGGGTGGCCAAGGCAAAAGGGTAACCATCACCGGAGGGAGAATCTTGCTCTAGGGCTACAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATACCATTGGATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAACGTCGTCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTGTTGATATTGGATGAACCTCTTGCTGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTCTGAAGCATCTGAAAAAGGAATTAACTGTGATAGTTGTCAGCCACGATTTGAGGTTGTTTCTGTTTACTCTA 921 0.443 MTTAFKPPIGLRFLHPPPLFPPSIPCVFPSHSPQLHFAATHAELYPFKFPTTQLPRINCNYSSFEVRSCQLTLPPLLCHYPSPYVCLVLPDEVSELILSPVRDVSYQAPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIFIQKYGNDGNPSHPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHHRRENLALGLQRAINWVGLSGIPLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVIVVSHDLRLFLFTL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8560g00001 307 Pfam ABC transporter 116 269 IPR003439 GO:0005524
Mupr8560g00001 307 FunFam ABC transporter I family member 11 chloroplastic 92 306 - -
Mupr8560g00001 307 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 99 306 IPR003439 GO:0005524
Mupr8560g00001 307 Gene3D - 94 306 IPR027417 -
Mupr8560g00001 307 CDD ABC_cobalt_CbiO_domain1 101 304 IPR015856 GO:0005524|GO:0016020|GO:0055085
Mupr8560g00001 307 PANTHER HEAVY METAL TRANSPORTER 95 302 - -
Mupr8560g00001 307 SMART AAA_5 125 306 IPR003593 GO:0016887
Mupr8560g00001 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8560g00001 Mupr-Chr8560 885 6618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8560g00001 91 300 Calmodulin-binding Proteins AT2G36910 24.664 6.34e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8560g00001 - - vun:114196181 409.068