Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8549g00006 ATGACCAAGAAGAGAGGGTCACATATGAATAGAGTTGTGAGAGAGATCCAACGTTGCAAGTCAACTGAGTTCTGCTCTCCCAGCATCTCTGACAGAACCTTCAAAGACACAAAAAACACCCAAACACACAACACCAACACCCACATAACAAAATGCATATTTGAAATTACCCTTTTGCCCTCCCTACTTCTGCCACCGCCCACAATGGACGCCGCCGCCGCCGCCACCTCTGCCGAACCCCGCCCGACTTCGGAGCTCCACCTCAACGGGACATCGGAGGATCCGAATCGAACCGGGTCGGGTCATAATTCGACGGCGAGGTACAAACTGATGTCGCCGGCGAAACTTCCGATCTCGAGGTCGCCGTGCATCACGATTCCTCCAGGACTGAGTCCGACGTCGTTTCTGGAATCCCCTGTTCTTCTTTCCAATATGAAGGTGGAGCCTTCACCAACTACAGGGTCCCTTCGTAAGCTTCAACAATATGGTTCTATGGCTTCTGCTGCCTCTGCCACATTTCCAGTAACCACTGCATGCTTCAATACCAATACTGTTGATGACAGAAAATCAAGCTTCTTTGAGTTTAAACCACTCAATAGATCAAATATGGTTCCTGCAGACTTCAACAACCATGTAAGTAAACAATCTACTCAAGTAGAAGGTCCAGGAAAAGCTCAATCATATGCTTCCTCACCATTAGTTGAAAGTGAGATATCAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTACAAATGGTTAGTTCTGGTGCCAGTGCTCCTGTTGATGTTGATTTGGATGACATTAACTACAAAGGCAACACAGCTACAAAGCTTCAAGCATCACATGTTGAGGTTAGAGGCAGTGGACTTTCAGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAGCTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGCTGCCGATACTCTACTGGTACTGTTATGTCTATTCAAAGAGAAATATCTGATAAGGCTTCTTCTGACAAAGCATCCACTATGTATGGTCAGGTGTCTCATGCTGCTGAGCCCAACAGTACTCCAGAGTCATCGCCTGTAGCAACAAATGATGATGGTTTAGAGGGTGCCAGATTTGTGTCGCACAGGACTAATGAAGAGATTGATGATGACGATCCCTTCTCAAAACGAAGAAAAATGGAACTTGGAAATGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAACCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAACCCTAACCCAAGGAGTTATTACAAATGCACAAATGCAGGTTGTCCTGTGAGAAAACATGTGGAGAGGGCATCGCACGATCCGAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGTCATGACATGGCAGTGGCAGGCAGTGCAGGAGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGCATGGGCATTAGCTCACCTGCTCAACATAGATCAAACACTGAATTTGGGAACATTAGCAATTCCAATTTCAAGTTTGTTCATACCACCTCAGCTCCTGTATACTTTGGTGTTCTAAATAACAGCTCAAACCCCTATGGTTCTAGAGACAATAGGAGTGATGCTCCATCTTTAAACCATTCCTCATATCCATGCCCACAGAGCATGGGAAGAATACTAATGGGTCCATGA 1920 0.4469 MTKKRGSHMNRVVREIQRCKSTEFCSPSISDRTFKDTKNTQTHNTNTHITKCIFEITLLPSLLLPPPTMDAAAAATSAEPRPTSELHLNGTSEDPNRTGSGHNSTARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLRKLQQYGSMASAASATFPVTTACFNTNTVDDRKSSFFEFKPLNRSNMVPADFNNHVSKQSTQVEGPGKAQSYASSPLVESEISVPSNELSLSSPVQMVSSGASAPVDVDLDDINYKGNTATKLQASHVEVRGSGLSVAAEKTSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTVMSIQREISDKASSDKASTMYGQVSHAAEPNSTPESSPVATNDDGLEGARFVSHRTNEEIDDDDPFSKRRKMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVAGSAGGQTRIKLEESDTISLDLGMGISSPAQHRSNTEFGNISNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRSDAPSLNHSSYPCPQSMGRILMGP 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8549g00006 639 Gene3D WRKY domain 455 531 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 Gene3D WRKY domain 291 359 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 ProSiteProfiles WRKY domain profile. 294 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 Pfam WRKY DNA -binding domain 471 527 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 Pfam WRKY DNA -binding domain 300 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 SMART WRKY_cls 470 529 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 SMART WRKY_cls 299 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 FunFam WRKY transcription factor 289 359 - -
Mupr8549g00006 639 FunFam WRKY transcription factor 33 457 523 - -
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 71 105 - -
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 609 639 - -
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 609 629 - -
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 82 105 - -
Mupr8549g00006 639 SUPERFAMILY WRKY DNA-binding domain 296 358 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 SUPERFAMILY WRKY DNA-binding domain 462 530 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 ProSiteProfiles WRKY domain profile. 465 530 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 376 411 - -
Mupr8549g00006 639 MobiDBLite consensus disorder prediction 376 408 - -
Mupr8549g00006 639 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 137 567 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8549g00006 Mupr-Chr8549 27467 32647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8549g00006 111 639 WRKY Transcription Factor Family AT4G26640 55.172 6.93e-180 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr8549g00006 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8549g00006 - - gmx:100816583 1035.4