Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8549g00002 ATGGCTGCTATGATGTCTCTCTATCCTTATAACCCCTTGCAATACTTTTCGTCTCCTTCGTGTTTCCGTTCTCAAATTTTGAATTTGAAGAGAGGGCATTTGGGTTCTGCAAGGTGGAAGAATTTGGTGAAACTTGCAGCGCATTCCAATCCGAAGATTCTCAAGACCAACAGAAAGTCAAGGTATGGAGAGGCCTTGTCGCTGTACGATAGTGACGAAGACGACGAAGAAATCGATGATGACGACGACGACGAAGAGGACGAGGATGAGGATGATTGGCTCTCTGATGATGAATTTGCTGAGCCTGCTGACTTTGATGTTAATAACAAGAGATTTAAGTCAAAGAAGAATAAAGGAAATGATAGAGAGCAGGAGTTGGAGTGGGGTTTGATATCTTTTGACAATGAACAAAGTATTAGATTGCCTAGAAGTGAGAGAGTGGCATCTTTACAACGAAATGAGAGTGGAAAGCTTAGTAGAAATGTAAAGGATAAAAAATATCCACGGTTGTCTGAAGAGATTCCTTTGGATGTGAAATGGTTACCACTTCTTGATTACTTGAGCACCTTTGGAATAAAGGAATCACACTTTATCCAAATGTATGAGAGGCACATGCAATCACTTCAAATTAATGTTTGTTCTGCACAGGAAAGGTTAGAATACTTATTAAGTGTTGGTGTTAAGCATAGAGATGTTAGAAGAATCCTTTTGAGGCAGCCACAAATTCTTGAATATACAGTGGAGAACAATTTAAAGTCTCGTGTTGCTTTCTTGAAGGGCCTGGGCATACCTAATTCTAGAATAGGGCAAATTATTGCTGCTTCTCCATCCTTGTTTTCTTATAGTGTTGAGAATTCTTTAAAACCAACAGTAAGATATTTAGTTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATACTCGTTATATGTTTCTTACCAAGGAATTGGGTGCCCCCAGAGATAGCATTGTAAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCAGATATCGTGAAAGTCTTGACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAGGAGAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAGGTGCAATCCTTGACCAAATACCCAATGTATCTTAGCTTATCTTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCCCCTAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACTGATGAATGCTTTTGCCAACAGTGGGCTGGAACTAGTTTGGATAAATATTTGGCATTTCGTCAGAGATTATTACTTAAAAAGTTTGCTCAGAAATATGAAAGAAAA 1473 0.389 MAAMMSLYPYNPLQYFSSPSCFRSQILNLKRGHLGSARWKNLVKLAAHSNPKILKTNRKSRYGEALSLYDSDEDDEEIDDDDDDEEDEDEDDWLSDDEFAEPADFDVNNKRFKSKKNKGNDREQELEWGLISFDNEQSIRLPRSERVASLQRNESGKLSRNVKDKKYPRLSEEIPLDVKWLPLLDYLSTFGIKESHFIQMYERHMQSLQINVCSAQERLEYLLSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLKGLGIPNSRIGQIIAASPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDIVKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAQKYERK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8549g00002 491 PANTHER CGI-12 PROTEIN-RELATED 181 463 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 MobiDBLite consensus disorder prediction 69 95 - -
Mupr8549g00002 491 MobiDBLite consensus disorder prediction 65 95 - -
Mupr8549g00002 491 Gene3D Transcription termination factor 3, mitochondrial 242 479 IPR038538 -
Mupr8549g00002 491 FunFam Transcription termination factor MTERF9, chloroplastic 244 479 - -
Mupr8549g00002 491 Pfam mTERF 247 439 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 Pfam mTERF 185 258 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 379 411 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 269 301 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Mupr8549g00002 491 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr8549g00002 mTERF 9.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8549g00002 K15031 - gmx:102660933 825.854