Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8545g00002 ATGGCTCCCAGAAAACCCCAAAAGGTTGTACAAATGGTAGACACTACTACTACTAACCGTGATCATGAGCCAAAGAAGATCGTTGTCAAAACTTTGCCATTCTTCAAACTCTTGAGCTATGCTGACCTTCTAGACTGGATTCTCATGGCTTTGGGAACTCTAGGTTCGATTGTGCATGGCATGGCACTTCCTCTTGGGTATCTCTTGTTGGGAAAAGCTCTTAATGCTTTTGGCAACAACATCCACGACATAGATGCCATGGTTAAAGCTCTTAAAAAGGTTGTTCCATACGTGTGGTATATGGCCATCGCCACATTTCCTGCTGGGGTACTTGAGATTGGTTGTTGGATGTATGCAAGTGAAAGACAGTTGTTGCGGCTAAGATTAGCATATCTAAGAGCAGTCCTGAACCAAGAGATAGGGGCTTTTGATACAGAATTAACAAGTGGAAAAGTCATCGGTGGAATAAGCAAGCATATGAGTGTCATACAAGATGCCATTGGTGAGAAGCTGGGTCACTTCACCTCTAGCTGTGCCACTTTCTTTGCTGGAATTGTGATTGCTGCCATATGCTGTTGGGAAGTGGCGCTTCTCTGTTTAGTGGTTGTCCCACTTATTCTTATCACTGGGGCAACTTACACCAAGAAAATGAACAGCATATCAATCGTCAAAATGTTTTTCCATTCTGAAGCTACATCTATGATAGAGCAGACAATATCACAAATAAAAACAGTTTATGCTTTTGTTGGAGAGAATTCTGCAACCAAATCCTTTACAGAGAACATGGAAAAACAATACGTTATAAGCAAAGGAGAGGCACTTGTGAAGGGAGTTGGGACAGGGATGTTTCAAACAGTGAGTTTCTGTTCTTGGGCACTCATTGTATGGATTGGAGCTGTTGTGGCCAGCGCCGGAAGAGCAAGTGGAGGAGATATATTGAGTGCAGTGATGAGTATTCTCTTTGGTGCCATATCTCTCACTTATGCAGCACCAGATATGCAAATATTCAATCAGGCAAAGGCTGCAGGATATGAAGTTTTTCAAGTGATCCAAAGAAAGCCTCTAATAAGTAATGAATCAGAAGGGAAGATGTCTAGCAAAATCAAAGGTGACATTGACTTACAAGATGTTTACTTTACCTACCCATCACGGCCAGAGAAACCTGTCCTTCAAGGACTGTCCTTGTCAATTCCAGCAGGAAAGACAGTAGCACTAGTAGGTAGCAGTGGCTGTGGAAAGAGCACTGTTATTTCCCTGGTTAGCAGATTTTATGACCCCTCCAGAGGAGAAATTTTTATTGATCATCACAATATCAAGGATCTCAATCTGAAGTTCCTTCGGAGAAATATAGGGGCTGTTTCCCAAGAACCATCACTCTTTGCAGGCACCATCAAAGATAACTTGAAAGTGGGAAAGATGGACGCAGATGATCAAGAGATTCAGAAGGCAGCAGTAATGTCAAATGCACACTCTTTCATATCACAGTTGCCTAATCAGTACCTAACAGAGGTAGGAGAAAGGGGCGTCCAATTATCAGGAGGCCAAAAACAGAGAATTGCAATAGCAAGAGCTGTGTTGAAAAATCCTCCCATTCTTTTGCTTGATGAGGCCACTAGTGCCCTCGATTCAGAGTCTGAAAAGTTGGTTCAAGAAGCACTTGAGACAGCTATGCAGGGAAGAACTGTCATCTTGATTGCACACAGGCTCTCAACAGTTGTAAATGCAGATATGATTGCTGTAGTAGAGAATGGACAAGTTGCAGAGACAGGAACACACCAGAGTTTGTTAGACACAAGCAGATTTTATAGTACATTATTCAATGTGCAGAACCTTGAACCAGTTCCTGAATCCAGAGCTACAATTTCCAAGAATAGAAGTGCCCACCAAGAAGATTTTCCTGATGAAACTAAACCACTAGTAGAGGTACAGGGAGAGGTCCAAAGAAATATCACTGAGCATTCTGTGCTAAAGGAACAGAACAAAATGAGCAGCGGAGAAAGAAATATATTTTTCAGAATTTGGTTTGGTTTAAGAAAGAGGGAGCTGATCAAGATTGCTATTGGCTCATTTGCAGCAGCTTTCTCTGGCATTTCAAAGCCATTCTTTGGGTTCTTCATCATCACCATTGGAGTAGCATACTTTAATGAAGATGCAAAACAAAAAGTTGGATTTTATTCAGCCATCTTCACTGCAGTAGGGTTGCTTTCATTATTCAGCAACACCTTCCAGCATTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGGCAAATCTCAGGCGTGCTCTGTATTCAGGTGTGCTGCGTAACGAAGTAGGCTGGTTTGACAAATCTGAGAATACAGTTGGTTCATTGACTTCGCACATTATCAGTGACACTGCCATGGTCAAAGTCATCATTGCTGATCGAATGTCCGTAATTCTGCAATGCATTTCCTCCATACTGATCGCAACAGTTGTCAGCATGGCTGTCAACTGGAGAATGAGTTTGGTAGCTTGGGCTGTGATGCCCTGCCACTTCATAGGTGGTCTCATTCAAGCCAAGTCTGCCAAAGGATTTTCAGGTGACTACTCTGCTGCACATTCTGAGCTTGTTGCTCTTGCATCTGAGTCTGCAACCAACATAAGGACTATTGCATCATTCTGTCACGAAGAACAAGTACTGAGGAAAGCCAAAACATGCCTGGAAATTCCAAAGAAAAAGTATAGGAAAGAAAGTATCAAATATGGGATTATTCAAGGCTTCTCCCTTTGCTTGTGGAACATTGCACATGCTGTTGCTTTGTGGTACACAACAATTCTGATTGACAGACGTCAAGCCACTTTTAAAAATGGAATAAGATCATACCAAATTTTTTCTCTCACAGTTCCTTCTATCACAGAATTATACACACTGATCCCAACTGTCATCTCTGCTATCAATATACTAACCCCAGCATTCAAAACCCTTGACCGTAAAACTGAAATTGAACCAGACATATCAGATGATTCCCAACCTGAGAGGATCCAAGGAAATGTAGAATTTGAAAATGTAAAATTCAACTACCCTTCAAGACCTGCAGTCACTGTTCTTGACAATTTCAGTTTACAAATTGAAGCCGGATTGAAGGTAGCTTTTGTAGGACCAAGTGGAGCTGGAAAATCCTCTGTTTTGGCCCTTTTACTAAGATTTTATGATCCACAGGCAGGAAAGGTATTAATTGATGGGAAAGACATACAGAAATATAATCTGAGATGGTTAAGGACACAAATAGGACTGGTACAACAAGAGCCACTGCTTTTTAATTGCTCGATTAGAGACAATATTTGCTATGGCAATAATGGGGCTTCTGAAAGTGAAATAGTGGAGGTTGCTAAAGAAGCAAACATACATGAATTTGTAAGTAATCTACCAAATGGATATAACACTGTCGTTGGAGAGAAAGGCTGCCAGCTTTCTGGAGGACAAAAGCAAAGAATAGCCATTGCCAGAACCTTACTAAAGAAGCCTGCAATATTACTCCTTGACGAAGCAACAAGTGCTCTTGATGCTGAATCTGAAAGAATTATAGTAAATGCTTTAAAAGCAATACATCTGAAGGAAGACAGTGGCTTGTGTTCAAGAACCACCCAGATCACAGTAGCTCATAGGCTTTCCACAGTAATAAATTCAGATACTATAATTGTCATGGATAAAGGTAAAGTTGTAGAGATGGGTTCCCACTCAACCCTAATAGCAGCAGAGACAGGACTTTATTCAAGGATCTCCAGGTTACAGAGCTTTGAAGAAACTTCATAG 3774 0.4131 MAPRKPQKVVQMVDTTTTNRDHEPKKIVVKTLPFFKLLSYADLLDWILMALGTLGSIVHGMALPLGYLLLGKALNAFGNNIHDIDAMVKALKKVVPYVWYMAIATFPAGVLEIGCWMYASERQLLRLRLAYLRAVLNQEIGAFDTELTSGKVIGGISKHMSVIQDAIGEKLGHFTSSCATFFAGIVIAAICCWEVALLCLVVVPLILITGATYTKKMNSISIVKMFFHSEATSMIEQTISQIKTVYAFVGENSATKSFTENMEKQYVISKGEALVKGVGTGMFQTVSFCSWALIVWIGAVVASAGRASGGDILSAVMSILFGAISLTYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNESEGKMSSKIKGDIDLQDVYFTYPSRPEKPVLQGLSLSIPAGKTVALVGSSGCGKSTVISLVSRFYDPSRGEIFIDHHNIKDLNLKFLRRNIGAVSQEPSLFAGTIKDNLKVGKMDADDQEIQKAAVMSNAHSFISQLPNQYLTEVGERGVQLSGGQKQRIAIARAVLKNPPILLLDEATSALDSESEKLVQEALETAMQGRTVILIAHRLSTVVNADMIAVVENGQVAETGTHQSLLDTSRFYSTLFNVQNLEPVPESRATISKNRSAHQEDFPDETKPLVEVQGEVQRNITEHSVLKEQNKMSSGERNIFFRIWFGLRKRELIKIAIGSFAAAFSGISKPFFGFFIITIGVAYFNEDAKQKVGFYSAIFTAVGLLSLFSNTFQHYFFGVVGEKAMANLRRALYSGVLRNEVGWFDKSENTVGSLTSHIISDTAMVKVIIADRMSVILQCISSILIATVVSMAVNWRMSLVAWAVMPCHFIGGLIQAKSAKGFSGDYSAAHSELVALASESATNIRTIASFCHEEQVLRKAKTCLEIPKKKYRKESIKYGIIQGFSLCLWNIAHAVALWYTTILIDRRQATFKNGIRSYQIFSLTVPSITELYTLIPTVISAINILTPAFKTLDRKTEIEPDISDDSQPERIQGNVEFENVKFNYPSRPAVTVLDNFSLQIEAGLKVAFVGPSGAGKSSVLALLLRFYDPQAGKVLIDGKDIQKYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGNNGASESEIVEVAKEANIHEFVSNLPNGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERIIVNALKAIHLKEDSGLCSRTTQITVAHRLSTVINSDTIIVMDKGKVVEMGSHSTLIAAETGLYSRISRLQSFEETS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8545g00002 1257 PANTHER ABC TRANSPORTER B FAMILY 14 740 IPR039421 -
Mupr8545g00002 1257 CDD ABC_MTABC3_MDL1_MDL2 372 609 - -
Mupr8545g00002 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1251 IPR027417 -
Mupr8545g00002 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 988 - -
Mupr8545g00002 1257 CDD ABC_MTABC3_MDL1_MDL2 1005 1251 - -
Mupr8545g00002 1257 Pfam ABC transporter 1023 1172 IPR003439 GO:0005524
Mupr8545g00002 1257 SUPERFAMILY ABC transporter transmembrane region 676 990 IPR036640 GO:0005524|GO:0016020
Mupr8545g00002 1257 Gene3D - 362 610 IPR027417 -
Mupr8545g00002 1257 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524|GO:0016887
Mupr8545g00002 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 609 IPR027417 -
Mupr8545g00002 1257 Gene3D - 995 1256 IPR027417 -
Mupr8545g00002 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 608 IPR003439 GO:0005524
Mupr8545g00002 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 49 346 - -
Mupr8545g00002 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1249 IPR003439 GO:0005524
Mupr8545g00002 1257 Pfam ABC transporter transmembrane region 50 323 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8545g00002 1257 Pfam ABC transporter transmembrane region 687 949 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8545g00002 1257 Gene3D ABC transporter type 1, transmembrane domain 36 967 IPR036640 GO:0005524|GO:0016020
Mupr8545g00002 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 338 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8545g00002 1257 SUPERFAMILY ABC transporter transmembrane region 36 354 IPR036640 GO:0005524|GO:0016020
Mupr8545g00002 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 970 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8545g00002 1257 SMART AAA_5 399 591 IPR003593 GO:0016887
Mupr8545g00002 1257 SMART AAA_5 1032 1226 IPR003593 GO:0016887
Mupr8545g00002 1257 FunFam ABC transporter B family member 4 362 616 - -
Mupr8545g00002 1257 Pfam ABC transporter 390 539 IPR003439 GO:0005524
Mupr8545g00002 1257 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524|GO:0016887
Mupr8545g00002 1257 FunFam ABC transporter B family member 1 995 1252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8545g00002 Mupr-Chr8545 6308 15559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8545g00002 22 1256 Calmodulin-binding Proteins AT2G36910 40.884 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8545g00002 K05658 - qsa:O6P43_014878 1884.38