Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8534g00009 ATGTTGGATAGGTTAGAACAAGAAGACAGCTATGAGGATGGTAGCATAGTGTTGGAGAAGAAAAGGAGACTGGGTTTTGATCAGGTGAAAGCCTTGGAGAGAAGCTTTGAGTTGGACAACAAGCTAGAGCCAGAGCGCAAGTCAAAGCTAGCAGAAGAACTAGGCCTTCAACCAAGACAGGTTGCTATTTGGTTCCAAAATCGTCGAGCACGTTGGAAAACCAAGCAATTAGAGAGAGACTATGGCATTCTCAAGTCCAGTTATGATGTTCTCAAGCTTGAGTACAATAATCTTGAGCAAGAAAATGAGGCTCTCACTGTTCAGGTAAGAGAATTGAAAGAAAAGATGTTGAGAAGAAAAGGTGAAAGCAATGAGTCAATGAAAGAGGAATCTCCCATTTCAGAGGTTAGAGACAGAGGAGCATCAGAGAGCAATTCAAATGGTGTGGTTAAGGAAGAAAGCAATATTGATTCTCCTGTGTGTGTGAATGGGTCTTTGCCCAGTTCAAGTTCAGTCATAAACTGGCTTCAATACTCTGATTCAAGAGTGTCCCCTGATAAAATGTTTCAGTCTCAGTTTATGAGAATGGAGGAGCAGAATTTCTTTAGTATCAATGAGTTCTGTTTCTTTTCAGTTGATCAATCCCCTACCCTG 654 0.4128 MLDRLEQEDSYEDGSIVLEKKRRLGFDQVKALERSFELDNKLEPERKSKLAEELGLQPRQVAIWFQNRRARWKTKQLERDYGILKSSYDVLKLEYNNLEQENEALTVQVRELKEKMLRRKGESNESMKEESPISEVRDRGASESNSNGVVKEESNIDSPVCVNGSLPSSSSVINWLQYSDSRVSPDKMFQSQFMRMEEQNFFSINEFCFFSVDQSPTL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8534g00009 218 CDD homeodomain 20 76 IPR001356 GO:0003677
Mupr8534g00009 218 ProSiteProfiles 'Homeobox' domain profile. 19 75 IPR001356 GO:0003677
Mupr8534g00009 218 SMART HOX_1 18 79 IPR001356 GO:0003677
Mupr8534g00009 218 MobiDBLite consensus disorder prediction 118 137 - -
Mupr8534g00009 218 SUPERFAMILY Homeodomain-like 21 86 IPR009057 -
Mupr8534g00009 218 FunFam Homeobox-leucine zipper protein HOX13 23 72 - -
Mupr8534g00009 218 Pfam Homeodomain 24 73 IPR001356 GO:0003677
Mupr8534g00009 218 ProSitePatterns 'Homeobox' domain signature. 50 73 IPR017970 GO:0000981|GO:0006355
Mupr8534g00009 218 Gene3D - 26 73 - -
Mupr8534g00009 218 MobiDBLite consensus disorder prediction 118 150 - -
Mupr8534g00009 218 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 10 154 IPR045224 GO:0003700
Mupr8534g00009 218 Coils Coil 81 115 - -
Mupr8534g00009 218 Pfam Homeobox associated leucine zipper 75 116 IPR003106 GO:0006355|GO:0043565
Mupr8534g00009 218 PRINTS Lambda-repressor HTH signature 46 55 IPR000047 GO:0003677
Mupr8534g00009 218 PRINTS Lambda-repressor HTH signature 55 71 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8534g00009 Mupr-Chr8534 33036 33964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8534g00009 1 116 Homeobox Transcription Factor Family AT5G65310 64.228 2.01e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr8534g00009 Homeodomain 5.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8534g00009 K09338 - qsa:O6P43_015335 266.159