Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8520g00005 ATGGAAACCTTTATCCGACGTGTCGTGATATCCGCCGTCCATTTGCCGAAGATGATCTTACTTCGCTATCTCTCATGCTTGGATCTGCAAATGCGCACCGTTTCGATCGCATCATCCATTTCCTCTCGTTCTCGAATTTTGAACCTCAGTCCGATCTATTTAAGTTTGTTCTTGCGATTTCTAAATTGGGGGAGGGATTATAATGATTTGGAGAAGCAATTGGAGAGAGAATTGCAGTCCAGTGGGAATTGCGTTATCTGCCAACAAACTATGGAAAGTGACAGGACAATCCCTGCTGCATCAGATGGAGTGGTAGATGGTGTTCAGAAAATTAGAGCTCTTCATGGGAGGACTACTGGCCCTACAAGGCGCTCTACAAAAGGACAATGGACACCTGAAGAGGACGAGATTTTGCGGAAGGCTGTTCAGCGTTTTAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTGAATCCAGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAGGATGAAATAATTATTGATTTGGTGAATAGATATGGGCCTAAAAAGTGGTCTACTATTGCACAACACTTACCTGGACGCATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAGGCATGGACGCAGGAAGAAGAGTTGGCTCTCGTACGCGCACATCAGATTTATGGGAACAGATGGGCAGAATTAGCGAAGATATTGAATGGAAGGACAGACAATGCTATAAAAAACCATTGGAACAGTTCCGTCAAAAAGAAATTGGATTCTTACATGGCATCGGGCTTGCTTACTCAGTTACAAAATGTACCATTTGTTGGAAATCTGAATCAACCTATTGCTTCAACCTCTTCGAGGTTGCAGCGGAGTGGAGATGATAATGGTCATAGGGGTACTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCTGGTCACTTTTCGTCAGCCAGAGAGATGAGCAGCGTTGTTTTACAAACTGGAGAGGAATACAGGCCAAATGAAGAACCTAGTCAAGCATCCTGTTCAGAGCCATATTATGTGTCTCTGGATGAAGTCACCGGATCCCTTCCAGACATGGCTGGCCAAGAGATTTGCACTTCTCAATTCATTGAGCAGAAATATACACACAAAGCTAGAAATTCCACAAATGGGGACTGCCAGCTTGATTTTATTGACTTGACCAATATTTCCTCACTGGATTTTGGGCAGGAATCACCACAGTTGCAAAATGATTGCATAGCTCCTAATGAAAGTCATGACATGGTGAATGTTCCATTTCAGACTTCGGAGGGGTTAGGTGTTGCAACGGCCATGGGACCTACATCTATGGACTCTATTAAACCAGAACACATGTTGATGTCTGATGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGTGATGAATGCTTTTCTTCTGGAGATTATAATAAAGGTGTAAACTATGACTTCTCAGGATGCACCTCATTTGTTTGTCATTCATCATTACCATCTATCCCATCAGTAGTTTCTTCTACTGGTGATAGGTTGATGTATGGCACCGAAGCCAATCGATTGGTTGGGTCTGAGGATCAGCAGTTTGTCTCCAGAACACAGGATAACATAATTTATGCCAATGACTTATCCAGTTCTCCTTGTATCCATCGGATAGACAGTGCAGAAATGCAAGAGCCATCAGATGTTGTGAACGACAATACAAAATTGGTCCCTGTAAGTAGTTTTGGCTGTGGATCAGACACTTCCTATCCAACGGATGAAAAGCCAAATGTGCATACAGAACAGGACACAGGTGCTCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGATATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGGGGTGATATGCAGCAAGAGTTCAGCCCCCTAGGTATCCGCCAATTTATGATGTCTTCTATGAACTGTCTAACTCCTTTTAGATTATGGGACTCGCCTTCTTGTGATGATAGTCCAGATGCTTTGTTGAAAAGTGCAGCTAAAACTTTCATGGGTACACCATCTATATTAAAGAAACGAAACCGAGAGCTTTTATCTCCACTATCAGATAAAAGAGTTGATAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTCTCCCGATTGGATGTCATGTTTAGTGACAACGAGACTCAGGGAGCAGATTTGCTTCCTTCATCTTCAATGCAAAAAAGGGACTCTGGTACCTCTGTTGAAGATAATAAAGAGAACTGTGGACAAGCTGTTGTTGAAGGGGAAGAAGTAGAGGAGAAAAATAAATCTGCAATTTTGGATGACAACAAATCAAATGATAGTAATTCTCAGGATAAAATTAAGCAGCAACCTCTTGATGTTGATTCTGAGATAAAGAATGATGTTAGTGCTGGTGCCGAGATCGTGCAACAACCTTCAGGAATTTTTGTTGAACATGATATCAATGACCTGTTACTGTATTCTCCCGATCAAGTTAATTTAAATTCAGACAAAGTTCTTAGTTTAAGTGCCAGAACTAAAAAATATCCATGCTCAAGGGTTAACTCCCCGTCTGTTTGGGTAAAGGACAATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAGTCTGTCAGTTCATCAGGCCCAGGGGAGAATTCGGGTGGTGATCACACTGGAAACGATGGAGGTCTTGAAGCTTGCGGCATATTTGGTGGAACACCTTTTAGGAAAAGCCTTGAATCGCCTTCTGCATGGAAATCTCCTTGGTTTGTCAACACTTTTTTGTCTAGCCCCAGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTCATGAGCCCTGGCGACAAAAGCTATGATGCGATAGGGTTGATGAAACAGATCAGCGAACAAACTGCTGCTCAATATGCCAGTGCTCATGAGATTTTGGGAAATGAAACTCCTAAGGCGTTACCAAAAGATGCATCTGGAAACGACAGGGATGGAGACCAGGAAAATGTCGATCCTCATAATCAGCATGGGAACCATTCTCAGTTGGCTTCAAGTGCTTTGGTGGAGCGACGCATACTGGACTTCAGCGAATGTGGATCTCCGGTCAAGGGTGATAACAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCTTCTTCGTATTTGTTGAAGGGC 3240 0.4225 METFIRRVVISAVHLPKMILLRYLSCLDLQMRTVSIASSISSRSRILNLSPIYLSLFLRFLNWGRDYNDLEKQLERELQSSGNCVICQQTMESDRTIPAASDGVVDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALVRAHQIYGNRWAELAKILNGRTDNAIKNHWNSSVKKKLDSYMASGLLTQLQNVPFVGNLNQPIASTSSRLQRSGDDNGHRGTEGEEVSQCSQESANAGHFSSAREMSSVVLQTGEEYRPNEEPSQASCSEPYYVSLDEVTGSLPDMAGQEICTSQFIEQKYTHKARNSTNGDCQLDFIDLTNISSLDFGQESPQLQNDCIAPNESHDMVNVPFQTSEGLGVATAMGPTSMDSIKPEHMLMSDDECCRILFSEAISDECFSSGDYNKGVNYDFSGCTSFVCHSSLPSIPSVVSSTGDRLMYGTEANRLVGSEDQQFVSRTQDNIIYANDLSSSPCIHRIDSAEMQEPSDVVNDNTKLVPVSSFGCGSDTSYPTDEKPNVHTEQDTGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSCDDSPDALLKSAAKTFMGTPSILKKRNRELLSPLSDKRVDKKLEIEMTSTLIKNFSRLDVMFSDNETQGADLLPSSSMQKRDSGTSVEDNKENCGQAVVEGEEVEEKNKSAILDDNKSNDSNSQDKIKQQPLDVDSEIKNDVSAGAEIVQQPSGIFVEHDINDLLLYSPDQVNLNSDKVLSLSARTKKYPCSRVNSPSVWVKDNERLSVAVTCVQSVSSSGPGENSGGDHTGNDGGLEACGIFGGTPFRKSLESPSAWKSPWFVNTFLSSPRIDTEITIEDFGYFMSPGDKSYDAIGLMKQISEQTAAQYASAHEILGNETPKALPKDASGNDRDGDQENVDPHNQHGNHSQLASSALVERRILDFSECGSPVKGDNSKSSAMSFSSPSSYLLKG 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8520g00005 1080 SUPERFAMILY Homeodomain-like 176 272 IPR009057 -
Mupr8520g00005 1080 ProSiteProfiles Myb-like domain profile. 174 225 IPR001005 -
Mupr8520g00005 1080 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 280 IPR017930 -
Mupr8520g00005 1080 FunFam Transcription factor MYB3R-2 232 294 - -
Mupr8520g00005 1080 Gene3D - 126 178 - -
Mupr8520g00005 1080 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 174 229 IPR017930 -
Mupr8520g00005 1080 Gene3D - 232 294 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 1002 1039 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 752 818 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 1054 1080 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 752 768 - -
Mupr8520g00005 1080 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 173 IPR017930 -
Mupr8520g00005 1080 Gene3D - 179 230 - -
Mupr8520g00005 1080 CDD SANT 233 273 IPR001005 -
Mupr8520g00005 1080 PANTHER MYB PROTEIN-RELATED 127 200 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 308 347 - -
Mupr8520g00005 1080 ProSiteProfiles Myb-like domain profile. 122 173 IPR001005 -
Mupr8520g00005 1080 CDD SANT 130 173 IPR001005 -
Mupr8520g00005 1080 FunFam Transcriptional activator Myb isoform A 126 178 - -
Mupr8520g00005 1080 ProSiteProfiles Myb-like domain profile. 226 276 IPR001005 -
Mupr8520g00005 1080 SMART sant 126 175 IPR001005 -
Mupr8520g00005 1080 SMART sant 230 278 IPR001005 -
Mupr8520g00005 1080 SMART sant 178 227 IPR001005 -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 1058 1080 - -
Mupr8520g00005 1080 CDD SANT 181 225 IPR001005 -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 780 807 - -
Mupr8520g00005 1080 Pfam Myb-like DNA-binding domain 231 273 IPR001005 -
Mupr8520g00005 1080 Pfam Myb-like DNA-binding domain 179 225 IPR001005 -
Mupr8520g00005 1080 Pfam Myb-like DNA-binding domain 127 173 IPR001005 -
Mupr8520g00005 1080 SUPERFAMILY Homeodomain-like 123 179 IPR009057 -
Mupr8520g00005 1080 FunFam Transcriptional activator Myb isoform A 179 231 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 1012 1029 - -
Mupr8520g00005 1080 MobiDBLite consensus disorder prediction 326 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8520g00005 Mupr-Chr8520 50270 57150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8520g00005 111 1060 MYB Transcription Factor Family AT4G32730 43.738 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8520g00005 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8520g00005 - K09420 gmx:100811335 1724.14