Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8514g00001 ATGAGCATGCTAAAGGAGAGTCCTCTCATCAGACTCCACAGTTTCGACCAAGGCCATGCATGGTTCGCTCTGTTGCACTTTCTCATTCATATCTCACCGCCAGTAACCGGTCAACCGGTAACAACCGCCACAGTGGACCCCGACAACAACAAATCCGTCGTCACCATCATGGCCATCGTGGCAGTCATGTTCTTCATCTCAGCCTTCCTCTCCCTCTACTCTCGCAAATGCTCCGACCGGCAAGCCCATACACATGGCAACAGGCTCGACCTTGCCCCTCCCACTGGCGCAGCCGTACTTTCACAAACGGAAGCCAATGGTCTGAATCAAGCCACCATCGAGACGTTCCCCACGTTCCTGTACTCAGACGTGAAGGGTCTGAAAATCGGAAAAGACACGTTAGCATGCGCCGTGTGCTTGAACGAGTTCGAAGACGACGAAACCCTCCGAATGATCCCCAAATGCTGCCACGTATACCACCCCATTTGCATCGACGCTTGGTTAGCCTCTCACTCCACGTGCCCGGTGTGCCGCGCCAACCTCGTTCCGCAACCCGAAGACATAAACACAAACACGAACATGCCACCAATATTGTCCATTCAAATACCCGACGAACAGGAAGAGGAAGAGGACCAGGAACACGAACATGAATACGAGACTGTTATTGGTGAGGAACATAAGAGAGACGGTGACGTGGAATCACCGAAGGTGGATTTGCTTGGGAGGATGCGCACGATGCATCAGAGCCGTCCATCGAGGTCTAGATCCACGGGGTTCTTATCCATGCTCTTATTTCCGCGGTCAAACTCGATGGGTCAACTGGGGGAAAACTATGAGAGGTTTACGCTAAGGTTACCCGAGGAGGTACGGAGGCAGATGGTGAACGCGACGACGCTGAAGCGTGCGAATAGCTGCGTGTGCTTTACGAGAATGAGCAGTGGCACGTGGGGGTATAGGACGAGAAGCGTGGGGAGAGGGTGTGTGCAGTACGAGAGGTTCAGTGCTGGTGAGGAACATTGGGGTTTCACTTTGACGCCACCGAGTCTTGTAAGGAACGGCTATTGGAATAGATCCGCGAGAAAATCACCGGTTCAGCGTTCGCCTGTGGCGTCGGATAATAATAATAATAATAATAATAATGCTGCTGAACAATCTTCTGATTTCTTGCGTCTTGGCTAG 1179 0.5216 MSMLKESPLIRLHSFDQGHAWFALLHFLIHISPPVTGQPVTTATVDPDNNKSVVTIMAIVAVMFFISAFLSLYSRKCSDRQAHTHGNRLDLAPPTGAAVLSQTEANGLNQATIETFPTFLYSDVKGLKIGKDTLACAVCLNEFEDDETLRMIPKCCHVYHPICIDAWLASHSTCPVCRANLVPQPEDINTNTNMPPILSIQIPDEQEEEEDQEHEHEYETVIGEEHKRDGDVESPKVDLLGRMRTMHQSRPSRSRSTGFLSMLLFPRSNSMGQLGENYERFTLRLPEEVRRQMVNATTLKRANSCVCFTRMSSGTWGYRTRSVGRGCVQYERFSAGEEHWGFTLTPPSLVRNGYWNRSARKSPVQRSPVASDNNNNNNNNAAEQSSDFLRLG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8514g00001 392 Pfam Ring finger domain 135 178 IPR001841 -
Mupr8514g00001 392 CDD RING-H2_EL5-like 136 178 - -
Mupr8514g00001 392 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Mupr8514g00001 392 FunFam E3 ubiquitin-protein ligase ATL6 97 184 - -
Mupr8514g00001 392 SMART ring_2 136 177 IPR001841 -
Mupr8514g00001 392 SUPERFAMILY RING/U-box 130 187 - -
Mupr8514g00001 392 MobiDBLite consensus disorder prediction 360 392 - -
Mupr8514g00001 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 183 IPR013083 -
Mupr8514g00001 392 PANTHER RING FINGER DOMAIN-CONTAINING 48 186 - -
Mupr8514g00001 392 MobiDBLite consensus disorder prediction 360 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8514g00001 Mupr-Chr8514 1667 3706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8514g00001 33 352 Rapid Response to Elicitors AT3G05200 37.423 1.36e-50 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8514g00001 K10664 - gmx:100814384 587.8