Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8493g00004 ATGGCGAATCATAGAGAGAAGGGAAACGAAGTGGACCAGAGTGAAGAGGGGCACCGTCACTCGTTGTCAATGCCAAACGTGTTTTCAGGTTTGAACAGAGAGAGGGAGATGTCAGCCATGATCTCGGCTTTGACCCATGTGGTACGTGGAGAGGGCAACGCTGATTTCTCGGTTCTTCATCGGAATATGGATAATAGTGTAAGTGATGGCGATGATGCTTTTATTGTGACATCTAGTTCTGTCACACCTTCTTCTTCTGCTGGTGGCTCTGCTCTCAAGAGAAGGAGGGAAGAAGATGATGATAATACAACAAATACATCATCCTTTGGTGATGTCTCCGGTGGAGCTTCATTCCCTGCTATTTCCACAATTGTAACAAGAGAGAGGAGGCAAATGGAAGAGTCAGTATACGATTATGAATACAGGGCAGAGAACGTGAGAGTGGAAGAACAAGCAAGGAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGGAAGTGGGCTGCGGAGATAAGAGACCCGTTCAAGGCTACAAGAGTGTGGTTAGGAACATTCGAGACAGCTGAGGCTGCAGCCAGAGCGTATGATCAAGCTTCTCTGCGTTTCAGAGGCAACAAAGCAAAACTCAATTTTCCTGAAAATGTTAGGCTCAGACAACCTCCACCACCCACCCATTTCAGCGTTTCAACTTCTCATGCTTCCCTTTTGTCTACCACTCAACCGATACTTCATACACAAGCTCCTCACGCTCAGTTCCCCGTCAGCCTGTATGATCAGATTTCTATGTCCTCTACCTTGGCTTCTCATCTTCAATCTTCATCGTCGCCATCAGCTTCCTATTCTTCTTCTTCTTCTTCTTCCACTATGACTTCTCCTGCATTTCCTTCCATTTACCTACCGGCATGGTCTTCTGGTTATAGCTCCTCTCCCTCGGGCTGA 939 0.4707 MANHREKGNEVDQSEEGHRHSLSMPNVFSGLNREREMSAMISALTHVVRGEGNADFSVLHRNMDNSVSDGDDAFIVTSSSVTPSSSAGGSALKRRREEDDDNTTNTSSFGDVSGGASFPAISTIVTRERRQMEESVYDYEYRAENVRVEEQARRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEAAARAYDQASLRFRGNKAKLNFPENVRLRQPPPPTHFSVSTSHASLLSTTQPILHTQAPHAQFPVSLYDQISMSSTLASHLQSSSSPSASYSSSSSSSTMTSPAFPSIYLPAWSSGYSSSPSG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8493g00004 312 SMART rav1_2 155 218 IPR001471 GO:0003700|GO:0006355
Mupr8493g00004 312 MobiDBLite consensus disorder prediction 270 291 - -
Mupr8493g00004 312 Pfam AP2 domain 155 204 IPR001471 GO:0003700|GO:0006355
Mupr8493g00004 312 MobiDBLite consensus disorder prediction 76 114 - -
Mupr8493g00004 312 SUPERFAMILY DNA-binding domain 155 213 IPR016177 GO:0003677
Mupr8493g00004 312 PRINTS Ethylene responsive element binding protein signature 156 167 IPR001471 GO:0003700|GO:0006355
Mupr8493g00004 312 PRINTS Ethylene responsive element binding protein signature 178 194 IPR001471 GO:0003700|GO:0006355
Mupr8493g00004 312 FunFam Ethylene-responsive transcription factor 2 154 213 - -
Mupr8493g00004 312 Gene3D AP2/ERF domain 154 214 IPR036955 GO:0003700|GO:0006355
Mupr8493g00004 312 MobiDBLite consensus disorder prediction 1 19 - -
Mupr8493g00004 312 PANTHER DNA-BINDING DOMAIN 107 281 IPR044808 GO:0003700|GO:0009873
Mupr8493g00004 312 MobiDBLite consensus disorder prediction 1 26 - -
Mupr8493g00004 312 CDD AP2 155 214 IPR001471 GO:0003700|GO:0006355
Mupr8493g00004 312 ProSiteProfiles AP2/ERF domain profile. 155 212 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8493g00004 Mupr-Chr8493 32429 33657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8493g00004 153 217 AP2-EREBP Transcription Factor Family AT5G61890 81.538 4.96e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr8493g00004 AP2 5.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8493g00004 - - gmx:100817546 288.5