Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8491g00007 ATGGTGCCATTTTTGCTCTTCCTACTTGTTTGGCTTCCTAGTGGTACCTTTGGCCAAATGAGTGGTGATGGCTGGCAAGCTGCACATGCCACATTCTATGGTGGCAAAGATGCTTCAGGGACAATGGGGGGAGCATGCGGATACGGAAACTTGATTAAGGAAGGCTACGGAACCGATACGACAGCGTTAAGCACTGCTCTTTTCAACAACGGGCTTACATGTGGGGCATGTTTCCAACTGATTTGCAACAATGCCCCAAAGTCGTGCATCCATGGCGCAGGCCCAATCACCGTAACTGCAACAAACTTCTGTCCCCCTAATGACACGTCCCTCAACGGTCCCGGCTGGTGCAATCCCCCGCTTCAACATTTTGATTTATCAGTCCCAGCTTTCACCAAAATTGCCATTTACCAAGCTGGAATAGTTCCTGTGCTCTACAGAAGGTATTCATCACTAAACTATATGCTCCACTAG 474 0.4873 MVPFLLFLLVWLPSGTFGQMSGDGWQAAHATFYGGKDASGTMGGACGYGNLIKEGYGTDTTALSTALFNNGLTCGACFQLICNNAPKSCIHGAGPITVTATNFCPPNDTSLNGPGWCNPPLQHFDLSVPAFTKIAIYQAGIVPVLYRRYSSLNYMLH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8491g00007 157 PANTHER EXPANSIN-A15 5 148 IPR002963 GO:0009664
Mupr8491g00007 157 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Mupr8491g00007 157 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576
Mupr8491g00007 157 PRINTS Expansin/Lol pI family signature 24 39 IPR007118 GO:0005576
Mupr8491g00007 157 PRINTS Expansin/Lol pI family signature 42 60 IPR007118 GO:0005576
Mupr8491g00007 157 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 148 IPR007112 -
Mupr8491g00007 157 SMART dpbb_1 60 146 IPR007112 -
Mupr8491g00007 157 Gene3D - 13 150 IPR036908 -
Mupr8491g00007 157 SUPERFAMILY Barwin-like endoglucanases 24 148 IPR036908 -
Mupr8491g00007 157 CDD DPBB_EXPA_N 24 148 - -
Mupr8491g00007 157 Pfam Lytic transglycolase 60 146 IPR009009 -
Mupr8491g00007 157 PRINTS Expansin signature 55 69 IPR002963 GO:0009664
Mupr8491g00007 157 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Mupr8491g00007 157 PRINTS Expansin signature 82 93 IPR002963 GO:0009664
Mupr8491g00007 157 PRINTS Expansin signature 131 144 IPR002963 GO:0009664
Mupr8491g00007 157 PRINTS Expansin signature 114 131 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8491g00007 Mupr-Chr8491 29520 31235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8491g00007 2 148 Expansin Gene Family AT2G39700 64.000 1.41e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8491g00007 - K20628 gmx:100797425 221.861