Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8489g00002 ATGGATTCTCCATTTCTGCTTCTGTTTCTGAGTCTCCTCTTCCTCTCTCTCTCTCATACTCTCTCCCTCTCCATTGACGATTTCCACCAAGCTTCGGGTGAGCTTCCCTTATTCTTGCCCAATTTCTGTATGTACAGCTTTCCCATTGTGGAACCTGATCCTGGTCACACAAAACTTCGTCTTTCAAGAGAAGGTTTGGAGGCAATTGAGAGAATAACCAACCCCATTGCAGCAGTGGCAGTGATTGGGCCGTATCGTTCTGGAAAATCTTTTTTGCTTAATCAACTTCTCTCTCTTTCTTGTTATGAAGGGTTTGGTGTTGGGCACATGCGTGACACCAAGACAAAAGGAATATGGGTTTGGGGAACACCTATAGATTTGGATATCAATGGAGTTAGAACTTCTGTCTTTTACCTTGATACAGAAGGATTTGAAAGTGTTGGGAAGTCCAATGTATATGATGATCGGATATTTGCTCTGGCAACTGTCTTGAGTTCTGTGCTTATATATAATTTGCCTGAGACGATACGTGAAGCTGACATCTCTCGACTCTCTTTTGCGGGTCAAGATGTTGCATTTGAACCTGCTAAGCTCTTATGGCTCATCCAACGTGACTTTTTGCAAGGGAAATCAGTGCAAGAAATGGTGGATGAAGCTCTTAGACAAGTCCCCAATACTGATGGTTTTCAACTTCATCAGGTCAATCAGATCCGGGATTCATTGGCTATTATGGGTGACAATAGCACTGCCTTTAGCCTACCACAACCACATCTCCAGCGGACAAAGCTTTGTGATATGAAGGATGGGGAGCTTGATCAATTATATGTCAAGAGAAGGGAGCAATTGAAAGAGCTTGTTGCTAGCAAAATCTCCCCAAAGATTGTACAGGGAAAGACTCTAAATGGGAAGGAGTTTGTCTCCTTCCTGGAGCAGATACTTGAAGCCTTGAACAAAGGAGAGATTCCATCAACAGGCTCTCTTGTGGAGGTTTTCAACAAGAATATTCTTGAGAAATGTCTGAAGTTATACAGTGAAAAGATGGAGACATTGGTTCTACCTCTTCCTGAGGAATCTCTGCAAGAGGCCCATGATAGATCTAGAGATGAAGTCATGGAAGTCTTTGATCAGCAGCATTTTGGTCGTCACCATGCTAAGAAATCAATTTTGCAGCTGGATGAAGAAATACAAAAGGCGTATAAGAATGTTGTTTTGCAAAACGAGTTTCTATCTTCAAAGCTCTGTGAGGCGCTGTACACCAGATGTGAGGACAAAATGGATCAGCTTCAAGTTCTCAAACTTCCATCCTTGGCAAAATTTAATGCAGGTTTTCTACAATGCAATACTAGTTTTGAGCGTGAATGTGTTGGACCTTCAAAAACAAATTATGAGCAACGCATGATGAAGATGTTGGGGAAGTCTCGGTCTCTGTTTATAAAGGAGTACAACCATAGGCTCTTCAATTGGCTGGTGGCCTTCTCCCTGGTTATGGTAGTGATTGGCCGCTTTTTTATAAAATTCATTTTGATTGAAATTGGAGCATGGGCACTCTTTATATTTCTGGAGACATACACAAGAATGTTTTGGTCGGCAGAGTCACTTTACTATAACCCAATTTGGCATTTTATAGTTGCAACATGGGAAACTCTTGTTTACAGCCCAATCCTGGATCTTGACAGATGGGCTATTCCCCTTGGTATAATACTGTCATTGTTTATTCTTTATTGGCGGTGTTACGGGAGAAGGAAATTTGGATCGCAGTGGCTATTACCTTTATACAGAAGCAATAAGAATGGTCCAAAGGATTTACCAATCATATCCAGAACAGCAGGAAGGCTAGCTGGTCGAGCTATTGGATATGTACAATTGGCTCGTGGTCAGTTTGAAACTGTTATGCAGCAATCCCAAGCTCGCCAGGTTCATAAGGAACTGCAAGACACAATGGCTCAGCTAGATGCTATTCGTCATGAAATTCGAAGTATATCAATCATAAATCCTGGCCCTTTGACCCGGAGGCTTGTGGATAATCCTGATCAGACATCTATCTTAAATGACAATAGGAAACCAGAAGATTCTGGAGAGAATAACTTGATACCCACTGTTATCAAGGATTCAACTTCAATTTCATCCAATTCATGCAATATGCAAAGTCAAGCAACTATTTATGCCAGATTGGCAGAGTCCCCTGCCATAAAGAATGAGTTGTCAGCAAGTAGTGCTGAAGTGGAGAAGATAGAAGACAAACTACAGCTTACTGTCTTACCAATTTCTGCTGAAAACGCTGGACTATTACCAAATCGTGGGGCTGATGTGAAAGGATCTGACATAGTTCTAGAAGCAATTTTGGAGGCAGAGTTAGTTGTTCAGGCTAGAAAATCTGTCGGACGAGTTCTTAGATTTTGGAATTTTGATATAAAGAAAAAGAAAGAGAAGCAGAAATCAGAAGTTCTTAAAAACACATCAACATCATCATTCTTCTCTTCTATTTCTCCGCGTAAACCATTAGGGGTCCCTAACTCGTTTCCCCAACTCGGCCGAGTCATGGCGAATCACCCTTCCGAAGCTCCCACAGACGACTTCCTCGAGCAAATCCTGGGCCTCCCGGCCTTCGCTTCCGCCGACTCCGCCTTGGCCGCCACCGATGCCTCTCCGATGATGCTTCAGCTCAACACCGGCGACGCCGCCGCCCACCTCGCCGCCGGAGCCGCCTTCCACGCGCCGCCGTACCAGTTGGGACTCAGCTTGGAGCAAGGGAAGGGAGGGTTCCTTACGCCCGAGGATGCTTCTGGAAGCGGCAAGCGCTTCCGCGACGACCTTGCTGATACCAGGCCTAAGAATGTTTTTCATGGGCAACCCATGCCTAGTACTGTTCCTACTGCTCCACATCCACCAGCAGTGCGACCAAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGTATAGCTGAAAGGTTGCGCAGAGAAAGAATAGCGGAAAGAATCCGGGCTTTGCAAGAACTGGTTCCAAGTGTCAACAAGACAGATAGAGCAGCCATGCTGGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGCAGATTGGGTGGAGCTGGTGCTGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTTGAGGAAGAAGGTGGTGAGGGAAGAAACCAACCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTCATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAAACAAAAGCACTCTGCATCATGCCCATCTCACTGGCATCAGCAATATACCAGTCACAACCATCTGATACCTCTAGTATAACAGGGTTTGATGTCAATGCCCTTAAAAATACAAGCAAACCCCTTCTTGATAAATTTCAT 3423 0.4438 MDSPFLLLFLSLLFLSLSHTLSLSIDDFHQASGELPLFLPNFCMYSFPIVEPDPGHTKLRLSREGLEAIERITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPIDLDINGVRTSVFYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAGQDVAFEPAKLLWLIQRDFLQGKSVQEMVDEALRQVPNTDGFQLHQVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDMKDGELDQLYVKRREQLKELVASKISPKIVQGKTLNGKEFVSFLEQILEALNKGEIPSTGSLVEVFNKNILEKCLKLYSEKMETLVLPLPEESLQEAHDRSRDEVMEVFDQQHFGRHHAKKSILQLDEEIQKAYKNVVLQNEFLSSKLCEALYTRCEDKMDQLQVLKLPSLAKFNAGFLQCNTSFERECVGPSKTNYEQRMMKMLGKSRSLFIKEYNHRLFNWLVAFSLVMVVIGRFFIKFILIEIGAWALFIFLETYTRMFWSAESLYYNPIWHFIVATWETLVYSPILDLDRWAIPLGIILSLFILYWRCYGRRKFGSQWLLPLYRSNKNGPKDLPIISRTAGRLAGRAIGYVQLARGQFETVMQQSQARQVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDNPDQTSILNDNRKPEDSGENNLIPTVIKDSTSISSNSCNMQSQATIYARLAESPAIKNELSASSAEVEKIEDKLQLTVLPISAENAGLLPNRGADVKGSDIVLEAILEAELVVQARKSVGRVLRFWNFDIKKKKEKQKSEVLKNTSTSSFFSSISPRKPLGVPNSFPQLGRVMANHPSEAPTDDFLEQILGLPAFASADSALAATDASPMMLQLNTGDAAAHLAAGAAFHAPPYQLGLSLEQGKGGFLTPEDASGSGKRFRDDLADTRPKNVFHGQPMPSTVPTAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQTKALCIMPISLASAIYQSQPSDTSSITGFDVNALKNTSKPLLDKFH 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8489g00002 1141 Coils Coil 636 656 - -
Mupr8489g00002 1141 Gene3D - 297 429 - -
Mupr8489g00002 1141 Gene3D - 970 1032 IPR036638 GO:0046983
Mupr8489g00002 1141 Pfam Guanylate-binding protein, N-terminal domain 58 287 IPR015894 GO:0003924|GO:0005525
Mupr8489g00002 1141 Pfam Helix-loop-helix DNA-binding domain 980 1024 IPR011598 GO:0046983
Mupr8489g00002 1141 Gene3D - 43 296 IPR027417 -
Mupr8489g00002 1141 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 73 186 IPR030386 GO:0005525
Mupr8489g00002 1141 FunFam Guanylate-binding family protein 42 296 - -
Mupr8489g00002 1141 SMART finulus 981 1030 IPR011598 GO:0046983
Mupr8489g00002 1141 Pfam Guanylate-binding protein, C-terminal domain 297 426 IPR003191 GO:0003924|GO:0005525
Mupr8489g00002 1141 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 973 1034 IPR036638 GO:0046983
Mupr8489g00002 1141 MobiDBLite consensus disorder prediction 673 696 - -
Mupr8489g00002 1141 PANTHER GUANYLATE BINDING PROTEIN 47 630 - -
Mupr8489g00002 1141 CDD GBP 70 289 - -
Mupr8489g00002 1141 FunFam Basic helix-loop-helix transcription factor 970 1032 - -
Mupr8489g00002 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 293 IPR027417 -
Mupr8489g00002 1141 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 975 1024 IPR011598 GO:0046983
Mupr8489g00002 1141 SUPERFAMILY Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 296 516 IPR036543 GO:0003924|GO:0005525
Mupr8489g00002 1141 MobiDBLite consensus disorder prediction 946 979 - -
Mupr8489g00002 1141 FunFam Guanylate-binding family protein 297 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8489g00002 Mupr-Chr8489 2256 28573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8489g00002 903 1127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.112 6.53e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8489g00002 GBP 6.2e-32 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8489g00002 - - gmx:100787000 1028.85