Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8483g00005 ACCGAGACTTGGCACAACAGGAAGTATGTTGAAGTTGTCCCACAAATGGAGAAACAGAGGCGTTTGGAGCAGATCCTCAGATCCCAAGAACGAGGTTCCAAGGTTATAATATTTTGTTCCACTAAGAGGTTATGTGATCAGCTTGCTCGTAGTATTGGCCGGAGTTTTGGGGCTGCTGCAATTCATGGGGACAAGTCTCAAGGTGAGAGAGACTGGGTTTTAAGTCAGTTCCGGACTGGGAAGTCACCAATTCTGGTTGCCACCGATGTTGCAGCTCGTGGGCTTGATATTAAGGATATAAGGGTGGTGATCAATTATGATTTCCCCACTGGAATTGAGGACTATGTGCACCGTATAGGAAGAACTGGAAGGGCAGGTGCTACTGGAGTATCATATACCTTTTTCTCTGAGCAGGACTGGAAACATGCAGGTGATTTAATCAAAGTTTTGGAGGGTGCTAATCAGCACGTGCTTCCAGAGTTAAGACAGATGGCTTCGCGTGGGCCACCAAACTTTGGAAAGGATCGGGGTGGGATGAGTCGGTTTGATTCTGGTGCTGGTGGTGGGCGGTGGGAAACTGGTGGTCGTGGTGGTTTTGGAGGTCGTGGTGGTGGCATGAGGGATGGTGGCTTTGGGGGACGTGGTGGCTTTGGGGGACGTGGCAGCGGCACAAGGGATGGTGGCTTTGGGGGACGTGGTGGTGGCACAAGGGATGGTGGCTTTGGGGGCCGTGGCGGTGGCTTTGGTGGTCGTGGTGGCATGGGGGATGGAGCTAGTGGGCATGGTGGGAGAGGTGATTTCTTTCGTGGTAGGGGCAACAGGGGTAGGGGATCTGGTGGCCCCCGTGGGGGTCATGTTGGTTGGGGTAGAGGTGAACGTGCTCTGGATGACCGGTACAACATGGATGGGCATGGACAAGGTTTTGGACGTGGACAATTTGACAATAGAAGAGATGCTTCTTACAAAAATAGTGGCAGAAGGAATAGTCGTAGCCCTGAAAGAGTTCGAACATGGGACTATAGCAGAAGTCCTAGCAGAAGTCATAGCAGAAGTCGTAGCAGGAGCTGGAGCAGGGGACGTAGTCGAAGCCGCAGCTGGTCTCGTGGTCGTAGTCACAGCTATAGCCGTAGCATTAGTCCGGGTCGAAGTTACAGCCGCAGTTGTAGCTGCAGTGGTCGAAGTTACAGCCGCAGTCGTAGCCGTAGCCGCAGCCGCAGCCCCAATTATGATAGGCGTGATAGGTCAGATCAACATCTTTCTGATGAAAAGGATCTCAAGGCACAGGAAGTAGGAACTTCTAATCCAAGAATGCTTCCCGTGTCTCCTGGCACACAAGGGAATTCCTTTTTAGGAACTGAACAAGTAGAGCCCCAACCTGTTGTTGGGAGCACTGATCCAGGTAATCCCGAAGCTGTAGCAGACCTTAGTCATCAATCAGCTTCTGATATTTAG 1452 0.5172 TETWHNRKYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRSFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMASRGPPNFGKDRGGMSRFDSGAGGGRWETGGRGGFGGRGGGMRDGGFGGRGGFGGRGSGTRDGGFGGRGGGTRDGGFGGRGGGFGGRGGMGDGASGHGGRGDFFRGRGNRGRGSGGPRGGHVGWGRGERALDDRYNMDGHGQGFGRGQFDNRRDASYKNSGRRNSRSPERVRTWDYSRSPSRSHSRSRSRSWSRGRSRSRSWSRGRSHSYSRSISPGRSYSRSCSCSGRSYSRSRSRSRSRSPNYDRRDRSDQHLSDEKDLKAQEVGTSNPRMLPVSPGTQGNSFLGTEQVEPQPVVGSTDPGNPEAVADLSHQSASDI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 403 429 - -
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 315 346 - -
Mupr8483g00005 483 CDD SF2_C_DEAD 9 135 - -
Mupr8483g00005 483 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 21 165 IPR001650 -
Mupr8483g00005 483 Gene3D - 3 168 IPR027417 -
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 370 397 - -
Mupr8483g00005 483 FunFam ATP-dependent RNA helicase RhlB 3 168 - -
Mupr8483g00005 483 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 9 165 - -
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 434 461 - -
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 164 483 - -
Mupr8483g00005 483 Pfam Helicase conserved C-terminal domain 18 126 IPR001650 -
Mupr8483g00005 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 171 IPR027417 -
Mupr8483g00005 483 SMART helicmild6 42 126 IPR001650 -
Mupr8483g00005 483 MobiDBLite consensus disorder prediction 347 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8483g00005 Mupr-Chr8483 20415 22695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8483g00005 33 146 Eukaryotic Initiation Factors Gene Family AT3G19760 43.478 6.66e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8483g00005 K12823 - gmx:100806371 337.806