Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8482g00003 ATGGCTCAGTCCTTCGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTTGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTACCCCGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCAACAAAGGATGCTGTAGAGAGAAATGTGTTTTCTGTTGCAAAAGGACTAATTAAAAGAGATGGCATCCCTGGTTTGTATAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCAAGAATCATATTCCTCTCTGCTCTAGAGACCACAAAGGTGGCTGCCTTCAGAATGCTTGAACCGTTTAAACTATCTGAAACTACCCAAGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCGCTTATTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTAATGGTGCAAGGATACTCAGGCCATGGCAAATATAGTGGGGGTCTGGATGTTGTACGCAAGGTTTTAAGGTCAGATGGCATCCGGGGATTGTATCGAGGGTTTGGTCTGTCTGTTATTACTTATTCACCTGCTAGTGCAGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTTCATTTGGAGATTCCTGGACCATGGTGCCAAATATGATGAAGGCAGTCCTAGTCTGCAGAAAATTATGTCAGTTCAGGCTACTGGAGCGTTTATTGCTGGTGCAACTTCATCTTGCATTACAACCCCATTGGATACTATCAAGACACGATTACAGGTAATGGGACATGAAAATAGAAGCTCTATAAAACAAGTTGCTAAAGATTTAATCAACGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGCACTTCAATGATATTGACTTATGAGTACCTGAGTAAGAACTCTTCCTCTCTCACTATATTTTCTTTATGT 957 0.4263 MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVSVALYPVSVVKTRLQVATKDAVERNVFSVAKGLIKRDGIPGLYRGFGTVITGAIPARIIFLSALETTKVAAFRMLEPFKLSETTQAAIANGVAGMTSSLIAQSVFVPIDVVSQKLMVQGYSGHGKYSGGLDVVRKVLRSDGIRGLYRGFGLSVITYSPASAVWWASYGSSQRFIWRFLDHGAKYDEGSPSLQKIMSVQATGAFIAGATSSCITTPLDTIKTRLQVMGHENRSSIKQVAKDLINEDGWKGFYRGFGPRFFSMSAWGTSMILTYEYLSKNSSSLTIFSLC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8482g00003 319 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Mupr8482g00003 319 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Mupr8482g00003 319 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Mupr8482g00003 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 310 - -
Mupr8482g00003 319 Gene3D Mitochondrial carrier domain 20 313 IPR023395 -
Mupr8482g00003 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Mupr8482g00003 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Mupr8482g00003 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Mupr8482g00003 319 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Mupr8482g00003 319 Pfam Mitochondrial carrier protein 232 308 IPR018108 -
Mupr8482g00003 319 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Mupr8482g00003 319 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8482g00003 Mupr-Chr8482 22422 25981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8482g00003 10 308 Chloroplast and Mitochondria Gene Families AT5G15640 74.086 8.95e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8482g00003 K15121 - gmx:100781796 576.63