Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8478g00008 ATGGCTATGACAATCCTGGCGCAGCTCAACGTGATCGAGTCACCTACGTGGGGATCCAGAAGCGTCGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAGAGAGATAAAAACTGGTGAAATTGTTGCTCTGAAGAGAATTCGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTAATCAAGTTGAAAGAAATTGTGACTTCTCCAGGTACATTTTTCAATGATCTAAATGCCCTGAGAAAGATGAACAAGGGAGGCCAGGCAAACGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGATCGACCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTTCTGACTGGGCTGCATTACTGTCACGTAAATCAAGTACTTCACCGTGATATCAAAGGTTCAAATCTTCTCATAGATAATGAAGGTAATCTGAAACTTGCAGATTTTGGATTGGCACGATCATTTTCTAATGAGCACAATGCAAATCTTACAAATCGTGTCATCACATTATGGTACAGACCCCCTGAGCTGCTGCTTGGGACAACAAGGTATGGGCCAGCTGTAGATATGTGGTCCGTAGGGTGCATTTTTGCAGAGCTTCTTCATGGGAAGCCCATCTTTCCTGGAAAAGACGAGCCGGAACAATTAAATAAGATTTTTGAGCTGTGCGGAGCACCAGATGAGGTGAACTGGCCTGGTGTTTCAAAGACTCCTTGGTATAATCAATTTAAGCCAACAAGACCAATGAAAAGACGTCTCCGGGAAGTTTTCAGACATTTTGATCGTCATGCTCTGGAATTGTTGGAGAAGATGCTGACACTTGATCCTGCTCAGAGAATTACTGCCAAGGATGCACTTGATGCCGAGTATTTCTGGACTGATCCATTACCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACACGAGTTTCAGACCAAGAAAAAGCGCCAGCAGCAACGGCAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCACAACAGCATTCTCGTCTGCCCCCTATTCAGCAGGCTGGGCAACAACACGCCCAAATGCGGCAAGGTCCTAACCACCCTATTCATGGGTCTCAACCAGCTGTTGCTGCAGGACCTAGCCATCATTATGGGAAGCCTCGAGGTCCCTCTGGTGTGCCAGGAAGATATCCTCCTAGTGGGAACCCTGGTGGGGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGAGGTGGCGGTGGTTATGGCAGTGGGCCATATCCTCCCCAAGGGCGGGGTGCACCATATGGGTCGAGTGGTATGCCTGGTGGGCCCAGTGGTGGTCCTCGTGGTGGGGGTGGTAGTGGCTATGGAGTTGGAGCTCCAAATTATCCTCAAGGTGGTGCTCCTTATGGTGGATCAGCGGCTGGGCGTGGCTCAAACATGATGGGTGGTAACCGCAACCAACAATATGGCTGGCAG 1590 0.4698 MAMTILAQLNVIESPTWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKRIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGTFFNDLNALRKMNKGGQANGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHSRLPPIQQAGQQHAQMRQGPNHPIHGSQPAVAAGPSHHYGKPRGPSGVPGRYPPSGNPGGGYNHPNRGGQGGGGGGYGSGPYPPQGRGAPYGSSGMPGGPSGGPRGGGGSGYGVGAPNYPQGGAPYGGSAAGRGSNMMGGNRNQQYGWQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8478g00008 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mupr8478g00008 530 SMART serkin_6 25 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8478g00008 530 SUPERFAMILY Protein kinase-like (PK-like) 18 341 IPR011009 -
Mupr8478g00008 530 FunFam Cyclin-dependent kinase C-2 12 130 - -
Mupr8478g00008 530 Pfam Protein kinase domain 25 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8478g00008 530 FunFam Cyclin-dependent kinase C-2 131 373 - -
Mupr8478g00008 530 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Mupr8478g00008 530 PANTHER CELL DIVISION PROTEIN KINASE 23 339 - -
Mupr8478g00008 530 MobiDBLite consensus disorder prediction 344 530 - -
Mupr8478g00008 530 CDD STKc_CDK9_like 25 333 - -
Mupr8478g00008 530 ProSiteProfiles Protein kinase domain profile. 25 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8478g00008 530 MobiDBLite consensus disorder prediction 381 403 - -
Mupr8478g00008 530 Gene3D Transferase(Phosphotransferase) domain 1 131 373 - -
Mupr8478g00008 530 MobiDBLite consensus disorder prediction 346 375 - -
Mupr8478g00008 530 Gene3D Phosphorylase Kinase; domain 1 14 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8478g00008 Mupr-Chr8478 23189 29317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8478g00008 1 530 Core Cell Cycle Gene Families AT5G10270 76.262 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr8478g00008 Pkinase 2.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8478g00008 K08819 - gmx:100793565 871.692