Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8473g00001 ATATGTGTAATTGTAACCACTGTTGGGTTTTCGCCTGGGTCCTGGAATTTTCGTGTTTTTAAGTTGAAATTGGCTGCAGAAACTTACGCCAAAAAGGATAATCCTCTTAAACATAAGCAAGAAATGGAAAACGTCCTTGAGTCTTCTGGCAGTCCAAGACATAGAAAGATATCAGCCAGATGGGATCCCGGGGAGGCATGTCGGCCTATAATTGATCAAGCACCCGTGTTTTATCCAACTATTGAGGAGTTTGAAGACACACTTGGCTATTTAGCTAGGATTCGCCCCCAAGCTGAACCTTATGGAATATGTAGGATTGTCCCTCCAGCTTGCTGGGTACCACCTTGCCCTCTTAAGGAGAAAGATTTATGGGAAAATGCAAAATTTCCCACTCGTATTCAGCAAATTGACTTGCTTCAGAACAGGGAGCCCATGAGAAAGAAAATTAGGGGAAGGAAACGAAAACGTAGAAAGCAGTCAAAGATGGGCATGGGTAGGAGAACTGCTAAATCAGGTTCTGAAGCTAATGTTGCTTTTGAACCTAATGAGAAGTTTGGATTCCAGTCGGGGTCAGACTTCACACTTAAAGACTTTAAGCAATATGCTAATGTTTTTAAAGATTGCTACTTTGGATTGAATGATGCCAATGAACACGAAAAAGTTAGTTATAATAGTCACCAGCAGAGATGGAAGCCCTCTGTGGATGAAATTGAAGGTGAATACTGGCGAATAATAGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAACTGGATCACTTGGAAGTGGTTTTCCTAAGACATCATCCCTAACTAAGAATGGTTCAGATAAGTATGTCCTGTCTGGCTGGAATCTGAATAACTTCCCGCGACTTCCAGGTTCTGCATTATGTTTTGAAGGAAGTGATATCTCAGGAGTTCTAGTTCCATGGCTGTATGTTGGAATGTGTTTTTCCTCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTTAATTATCTGCATTGGGGTGACCCAAAAGTATGGTATGGAGTACCTGGATGCCATGCTCTAGGTTTGGAAAATGCAATGAGAAAGCACTTGCCTGATTTATTTGAAGAACAACCAAATCTACTCAATGAATTGGTGACTCAGTTATCTCCTTCAATTCTTAAATCCGAGGGGGTGCCTGTATATTGCACTGTCCAGCATTCAGGGGAATTTGTTGTTACCTTTCCAAGGGCATACCACTGTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCTGTGAATGTGGCTCCTGTTGATTGGCTTGTGCACGGCCAGAATGCTGCTGAGCTTTACAGTTTGCAGTGCCGTAAAACTTCATTGTCTCATGACAAGTTATTATTTGGATGTGCTCAGGAAGCTGTGCATGCCCTTGCAGAGCTAACTCTTCATGGAAAAGAAATTGTAAAATATATAAAATGGAGAAGTGCTTGTGGGAAAGATGGAGTTCTTACCAAGGCAGTTAAGGCAAGGATGACTATGGAACAGGAGAGGCTTGACTGTCTTCCAACTCATTTAAAGATGCTGAAGATGGACAACGAGTTTGATTTGTTTAAAGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCCGTAGGTTGCAAGTGCTCTCCTGACAGTTATTCTTGTCTTAGACACTCAAATTTGTTTTGCTCATGTGAAATGGACCAAAGATTTGTTCTGTTTCGTTATTCTATGAATGAACTAAGTACATTGGTTGAAGCATTAGAAGGAGAATCACATGCTATTGAAGTGTGGGCAAATAGAAACACTGGAATGGTTTCTGCTAATGCTGAGGATGCTTGCATGTCTAAACAAGATGTGGAGAGTGTAATGTACCAAACCCAGAGTTACAAAGAAGGGAAAAACTCAACTTATTGTGTAGGAACTAATGATAAGTCAAATTCAAATATACCTAGAAGTTCTTACAGCCACATTTCTGCAGAGTTAGTCCACTCAAAGTTTCACCATGAAACGTTTAGTGCACCACATGACACTAAAGATTGTCGTCATAAAGATAATTTGAAGGAAAATAACTTGGTCGTGGACAATGAAGTTAAGATGGAGAAGGGAGGTTCTGTGGATTTGAATATTGATTTTATGTCTGGTGAACCTGAAAATTATTTTCTGCATGCTGCTGATTACCATCATAGTAAGGGTGTTCCATGTGTGGAAAATGTCTCCCATTCAGAGGCTAGAAACGAAGAAGACAACATGGATCCTGGGGCTGGTGGTATTGCTGCCTTGGAGAAAGTTATTCCATCATGTTCAAGGGATGTTCAAAATTCTTGTACACTTGATGGTTGTAAATTGTTTGGGGTGGATCTGCAGATGCATTCTGATTCAGGAGAGCAACTCAACGATGTATTTAAGATGGGTGATGTAGAAACCTCCAATACTACATCTTTGACAAACCGAAGCTTCTTAATGCAGAAATTTGGTATTTCTGTTGAGCCTGTAAATTTGGGCTCTGTTGTGTGTGGAAAGCTGTGGTGCAGTAAGCATGCAATATATCCTAAAGGATTCAAGAGTCGCGTTAAGTTCTTTAGCATTGTTGATCCCCCAAGAACCTGTAACTATGTTTCTGAAGTCTACGATGCTGGATTTCTTGGGCCTCTTTTCAAGGTTACCATGGAAGAACATCCAAGTGAGGCTTTCACAAATACCTCAGCAGATAAGTGCTGGGAAACAGTCCTTGACAGACTAAATCATGAAATCAAGAAGCGAAGGAGTCAAGGTGAAATGGAACTTCCTCCCTTGGAACTCCTGCAAAGCATTAACGGTCACAAAATGTTTGGTTTCCTTTCACCATCCATTGTTCAGTTTAATGTAGCATATCATGTTCTGACTTTTGATGTTTTAATCCATTCTGAAAAACTTCTCCAGGCCATTGAAGCTCAGGATCCCAATCATCAATGCGCTGAGTACTGGAATCACAAAGAAGTTGTCTCTGAATCTTCAGGCAGTGCCATTGATGACTGTAAGTTCAGTCATGGTTCAAGCAACTCTCTAGGTGATATCAAGACCAAACTTTTTGGTGTTGGTTTGATAACGCTGGAGCAAGATAGCACCAGAGGAAGTTGTGGTTCTTATGAAGAGATGAAATTGGTGCTACAAGGATTCTTGAAAAAGGCAAATCCTGATGAATTAAGTGCCATGCATAAGTTATTCAGCTCTGATGCACAGTTCAACAAGTGGAGAGTGGCATTTGTAACTCTGATAGAGGAAATCCAGAAA 3291 0.4096 ICVIVTTVGFSPGSWNFRVFKLKLAAETYAKKDNPLKHKQEMENVLESSGSPRHRKISARWDPGEACRPIIDQAPVFYPTIEEFEDTLGYLARIRPQAEPYGICRIVPPACWVPPCPLKEKDLWENAKFPTRIQQIDLLQNREPMRKKIRGRKRKRRKQSKMGMGRRTAKSGSEANVAFEPNEKFGFQSGSDFTLKDFKQYANVFKDCYFGLNDANEHEKVSYNSHQQRWKPSVDEIEGEYWRIIEQPTDEVEVYYGADLETGSLGSGFPKTSSLTKNGSDKYVLSGWNLNNFPRLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGCHALGLENAMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVYCTVQHSGEFVVTFPRAYHCGFNCGFNCAEAVNVAPVDWLVHGQNAAELYSLQCRKTSLSHDKLLFGCAQEAVHALAELTLHGKEIVKYIKWRSACGKDGVLTKAVKARMTMEQERLDCLPTHLKMLKMDNEFDLFKERECFSCFYDLHLSAVGCKCSPDSYSCLRHSNLFCSCEMDQRFVLFRYSMNELSTLVEALEGESHAIEVWANRNTGMVSANAEDACMSKQDVESVMYQTQSYKEGKNSTYCVGTNDKSNSNIPRSSYSHISAELVHSKFHHETFSAPHDTKDCRHKDNLKENNLVVDNEVKMEKGGSVDLNIDFMSGEPENYFLHAADYHHSKGVPCVENVSHSEARNEEDNMDPGAGGIAALEKVIPSCSRDVQNSCTLDGCKLFGVDLQMHSDSGEQLNDVFKMGDVETSNTTSLTNRSFLMQKFGISVEPVNLGSVVCGKLWCSKHAIYPKGFKSRVKFFSIVDPPRTCNYVSEVYDAGFLGPLFKVTMEEHPSEAFTNTSADKCWETVLDRLNHEIKKRRSQGEMELPPLELLQSINGHKMFGFLSPSIVQFNVAYHVLTFDVLIHSEKLLQAIEAQDPNHQCAEYWNHKEVVSESSGSAIDDCKFSHGSSNSLGDIKTKLFGVGLITLEQDSTRGSCGSYEEMKLVLQGFLKKANPDELSAMHKLFSSDAQFNKWRVAFVTLIEEIQK 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8473g00001 1097 Gene3D - 833 963 - -
Mupr8473g00001 1097 PANTHER LYSINE-SPECIFIC DEMETHYLASE 69 865 - -
Mupr8473g00001 1097 SMART fyrn_3 841 885 IPR003888 GO:0005634
Mupr8473g00001 1097 ProSiteProfiles JmjN domain profile. 74 115 IPR003349 -
Mupr8473g00001 1097 Pfam C5HC2 zinc finger 538 589 IPR004198 -
Mupr8473g00001 1097 ProSiteProfiles JmjC domain profile. 282 448 IPR003347 -
Mupr8473g00001 1097 ProSiteProfiles FYR domain FYRC motif profile. 887 978 IPR003889 GO:0005634
Mupr8473g00001 1097 SMART cupin_9 282 448 IPR003347 -
Mupr8473g00001 1097 SMART JmjN_1 73 114 IPR003349 -
Mupr8473g00001 1097 SMART fyrc_3 891 1007 IPR003889 GO:0005634
Mupr8473g00001 1097 MobiDBLite consensus disorder prediction 148 164 - -
Mupr8473g00001 1097 Pfam JmjC domain, hydroxylase 315 431 IPR003347 -
Mupr8473g00001 1097 MobiDBLite consensus disorder prediction 148 175 - -
Mupr8473g00001 1097 Gene3D Cupin 59 432 - -
Mupr8473g00001 1097 FunFam Putative lysine-specific demethylase JMJ16 833 969 - -
Mupr8473g00001 1097 Pfam F/Y rich C-terminus 889 959 IPR003889 GO:0005634
Mupr8473g00001 1097 ProSiteProfiles FYR domain FYRN motif profile. 827 885 IPR003888 GO:0005634
Mupr8473g00001 1097 Pfam jmjN domain 75 108 IPR003349 -
Mupr8473g00001 1097 Pfam F/Y-rich N-terminus 838 882 IPR003888 GO:0005634
Mupr8473g00001 1097 SUPERFAMILY Clavaminate synthase-like 189 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8473g00001 Mupr-Chr8473 8255 16747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8473g00001 27 639 JUMONJI Transcription Factor Family AT1G30810 61.264 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr8473g00001 JmjC 1.8e-44 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8473g00001 K11446 - gmx:100784581 1889.77