Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8465g00008 TGGTGTTCCCCCTACTTAATCAACCTGAGGAGGTCCTCCCAAAATTTCTACAAAGACACTGTTTTTTGGTTGGGACATCAAGCTAAGAAAGGGAAAGAGAGATCACAAGAAAGAGAATTCATCTTTCTTTGTGAACAGCTAAATATCTCAAAAGGAGAAGGCATGAATAGAGGTGTTCTTCAGAGCTCACCGGTGCAACAAATGATGACCGGGAACCCTAACTGGTGGAACATCAATATCAATAGCATGCCTCCACAAGCTCCTCCTTTCTTGTCCACTCCTTCCAACTTTCCTATCCCTTATGCCCCCACTTCTCTTCCCTTTCCTTCTTGGCATGAGAATCAAGACACTCCTGAGTCATGGAGCCAGCTACTCATGAGTGGAGTGGTGGATGAACAAGATAAGGCTGGAATGGGTCAGTTTCAGACTAAGAAGTTGGAGAACTGGGAGGATCAAATGCTAAGTCAAGCTCCAAACGCTTCTCTTGTTGATGTTAAACATGAAAACTCCGTTAACAGCTATGTATATGGGCATGGAAACGAAGAACTTCAGTCATCAAAGCCATCTTGGTCTCCAAAATCCTGTGTGACAAGTTTCAGTAGCAACATGTTGGATTTCTCTAACAACAAGTCAGATGCGAGGCATCCACCACCAGATCGATCTTCTGAGTGCAACAGCACTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTGCAACAACACAGACTACATTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCATACCATACTTGAGCGGTGGACCAGGAAACACGAGGCAGCAACATTCTGTAAGAAATACCATAAACCCATTTCTGGTTCAAGGAGAGAAGAATTGTATATTTCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGCTTGAAGAAGAAAGCAGCTGGAGAGCCGGATACTCAAGAAGAACCAAAGAAGGGCCTGAGGAGTAGAGGGTTGTGTCTGGTTCCGGTGTCATGCACACTTCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCTCCTGCCCTTGGAGGGGGCTTTCGTTAG 1188 0.4596 WCSPYLINLRRSSQNFYKDTVFWLGHQAKKGKERSQEREFIFLCEQLNISKGEGMNRGVLQSSPVQQMMTGNPNWWNININSMPPQAPPFLSTPSNFPIPYAPTSLPFPSWHENQDTPESWSQLLMSGVVDEQDKAGMGQFQTKKLENWEDQMLSQAPNASLVDVKHENSVNSYVYGHGNEELQSSKPSWSPKSCVTSFSSNMLDFSNNKSDARHPPPDRSSECNSTAAGGALKKARVQPSATTQTTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSIPYLSGGPGNTRQQHSVRNTINPFLVQGEKNCIFPEDPGQLLNENCLKKKAAGEPDTQEEPKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8465g00008 395 Gene3D - 242 297 IPR036638 GO:0046983
Mupr8465g00008 395 FunFam transcription factor bHLH68 isoform X1 246 299 - -
Mupr8465g00008 395 CDD bHLH_AtbHLH_like 247 296 IPR045239 -
Mupr8465g00008 395 MobiDBLite consensus disorder prediction 206 245 - -
Mupr8465g00008 395 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 249 299 IPR036638 GO:0046983
Mupr8465g00008 395 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 239 288 IPR011598 GO:0046983
Mupr8465g00008 395 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 122 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8465g00008 Mupr-Chr8465 51158 54725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8465g00008 55 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.847 2.97e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8465g00008 - - gmx:100786555 632.098