LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8465g00002	ATGGATCCTCCGCCGAAGAATTGGAGCATCCGCACCCGCTCCGAGATAACGGCCAAGTACGAGGTTGTCGATCGTGTCGGGTCGGGCGCCTACGCCGACGTGTACCGCGGGCGGCGGCTGTGCGACGGAGCGGCGGTGGCGCTGAAGGAGGTTCACGACTCCCAGTCGGCGTCTCGCGAAATCGAGGCGCTGCGGGTTCTGAAGGGGTCCCGAAACGTCGTCGTCATGCACGAGTTCTTCTGGCGCGAGGACGAGGACGCGGTTCTCGTGCTCGAGTTTCTCGGAACTGACCTCGCCGCCGTGATCGGAGAAGGTGGCGTCGGCGCCGGAGAGGTTAAGAGGTGGATGATGCAGGTTCTCAGTGGGGTGGACGCGTGTCACCGGAACATGATCGTGCATAGGGACTTGAAGCCTGGGAATTTGTTGATTTCGGATGATGGGGTGCTCAAGTTGGCTGATTTTGGACAGGCAAGGATACTTATGGAGTCTGGATTTGATGCTCCCCAGCAGAACCCGCCACCATATGAAGATGATGCTTCAAATAGTGAAAGCTCACTCCAACATCCTGAAGCTATTTCCCAATTGGACAACTTAAACCAGAGTGGATATGTGAATCAGGATGAGGGAACCGTGAGTCATGAAGAATACTTTAGAGTTTTGGATGAGATGAAAACCAAGAGCTACTCATATGACACTGATAAGGATACAAACATCCATGATGGAAACACCTCGTGTCTTGCAACGTGCACAACGAGCGACATAGATGATGATCTCTGCAAGGGTTCATTCACCTACGAAGCTGAGGAGGTGGGAGGGAATGAACTTGGTTGTCTCACGCCATGTGTTGGAACTCGGTGGTTCCAGGCTCCTGAGCTACTTTATGGATCCACAGACTATGGTTTAGAGGTTGATCTCTGGTCATTGGGATGTGTCTTTGCAGAGCTCTTAACGTCGAAGCCCTTGTTTCCTGGGACAAGTGATATAGACCAGCTCAGCAGAATTGTAAGTGTTTTGGGGGACTTTAATGAGGAAACTTGGCCTGGTTTTTCCAAACTTCTCGATTATGGAACAATTTCATTTGGTAAGGTGGAAGACCCTAGTTGTCTTGAGGCATGCATGCCCAATTGCTCCCATGATGAAGTTTCCCTAGTCAAAAGACTGGTTTGTTATGATCCAGCTAAGAGGGCCACAGCAATGGAATTACTTCAGGACAAGTACTTCAATGAAGAACCTCTTCCTGTTCCAATTTCTGAGTTGCGGGTTCCTTTGACTAGAAGTGGACAAGACCAGGATTCCCCTGGTGGGTCTCGTGGGTACAATGAAATGGGTTCTGAATCTGATTTGAAGGAGTTTGGCACTATGAATATCGCCACAACTGGTTCTGATTTATCTATACAGCTCCCTTGA	1407	0.5039	MDPPPKNWSIRTRSEITAKYEVVDRVGSGAYADVYRGRRLCDGAAVALKEVHDSQSASREIEALRVLKGSRNVVVMHEFFWREDEDAVLVLEFLGTDLAAVIGEGGVGAGEVKRWMMQVLSGVDACHRNMIVHRDLKPGNLLISDDGVLKLADFGQARILMESGFDAPQQNPPPYEDDASNSESSLQHPEAISQLDNLNQSGYVNQDEGTVSHEEYFRVLDEMKTKSYSYDTDKDTNIHDGNTSCLATCTTSDIDDDLCKGSFTYEAEEVGGNELGCLTPCVGTRWFQAPELLYGSTDYGLEVDLWSLGCVFAELLTSKPLFPGTSDIDQLSRIVSVLGDFNEETWPGFSKLLDYGTISFGKVEDPSCLEACMPNCSHDEVSLVKRLVCYDPAKRATAMELLQDKYFNEEPLPVPISELRVPLTRSGQDQDSPGGSRGYNEMGSESDLKEFGTMNIATTGSDLSIQLP	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8465g00002	468	MobiDBLite	consensus disorder prediction	174	188	-	-
	Mupr8465g00002	468	Pfam	Protein kinase domain	278	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8465g00002	468	Pfam	Protein kinase domain	20	163	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8465g00002	468	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	131	143	IPR008271	GO:0004672\|GO:0006468
	Mupr8465g00002	468	Gene3D	Transferase(Phosphotransferase) domain 1	106	413	-	-
	Mupr8465g00002	468	PANTHER	CELL DIVISION PROTEIN KINASE	19	413	-	-
	Mupr8465g00002	468	SMART	serkin_6	20	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8465g00002	468	Gene3D	Phosphorylase Kinase; domain 1	11	105	-	-
	Mupr8465g00002	468	MobiDBLite	consensus disorder prediction	418	468	-	-
	Mupr8465g00002	468	MobiDBLite	consensus disorder prediction	423	439	-	-
	Mupr8465g00002	468	ProSiteProfiles	Protein kinase domain profile.	20	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8465g00002	468	SUPERFAMILY	Protein kinase-like (PK-like)	5	422	IPR011009	-
	Mupr8465g00002	468	MobiDBLite	consensus disorder prediction	165	188	-	-
	Mupr8465g00002	468	FunFam	Cyclin-dependent kinase F-1	11	105	-	-
	Mupr8465g00002	468	MobiDBLite	consensus disorder prediction	451	468	-	-
	Mupr8465g00002	468	ProSitePatterns	Protein kinases ATP-binding region signature.	26	49	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8465g00002	Mupr-Chr8465	9366	11644	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8465g00002	4	468	Core Cell Cycle Gene Families	AT4G28980	60.714	0.0	584

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CCRK	Mupr8465g00002		Pkinase	1.8e-30	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr8465g00002	-		-	gmx:548056	823.157