Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8461g00004 ATGGAAAACGACGACGTTGATATGCTCGGTGCAGACACCAACGAAGCTGAATTGGATGACATGAAGAAGCGATTGAAGGAAATGGAAGACGAAGCTGCTGCTTTGCGCGAGATGCAGGCCAAGGTCGAGAAGGAGATGGGATCTGCGCAAGATCCTGCTACTGCTGGTGCAAGTCAGAACAATAAAGAGGAAGTAGATTCTCGATCAGTCTTTGTAGGCAATGTGGACTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACTGTAAACCGAGTCACCATCCGCACTGATAAGTTTGGCCAGCCAAAGGGTTATGCTTACGTAGAATTTCTTGAAGTAGAGGCTGTTCAAGAGGCTCTTTCGCTGAATGAATCTGAACTACATGGGCGTCAATTGAAGGTAACTGTTAAGAGGACCAACATACCGGGGATGAAGCAATATCGTTCTCGCCGGCCTAATCCTTACATGGGGTTTAGAGGCAGAGCCCCATATGCACCTCCTTTTGCCTATGCTCCTTTTGGATATGGGTACGTTGTTTTCAGTTCTTTTCTTTTCAACGTGTACTATTTTTGCTGTAATAGTAGACATGAAGCACTCTTTTTTAATTGCAGAAAGGTTCCAAGGTTCAGAATGGCGATGCGCTATAGCCCCTACTATTGA 675 0.4533 MENDDVDMLGADTNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPATAGASQNNKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALSLNESELHGRQLKVTVKRTNIPGMKQYRSRRPNPYMGFRGRAPYAPPFAYAPFGYGYVVFSSFLFNVYYFCCNSRHEALFFNCRKVPRFRMAMRYSPYY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8461g00004 224 MobiDBLite consensus disorder prediction 42 66 - -
Mupr8461g00004 224 SUPERFAMILY RNA-binding domain, RBD 56 166 IPR035979 GO:0003676
Mupr8461g00004 224 CDD RRM_II_PABPs 69 140 - -
Mupr8461g00004 224 SMART rrm1_1 69 140 IPR000504 GO:0003723
Mupr8461g00004 224 Gene3D - 7 141 IPR012677 -
Mupr8461g00004 224 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 144 IPR000504 GO:0003723
Mupr8461g00004 224 MobiDBLite consensus disorder prediction 52 66 - -
Mupr8461g00004 224 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 138 IPR000504 GO:0003723
Mupr8461g00004 224 Coils Coil 11 45 - -
Mupr8461g00004 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 17 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8461g00004 Mupr-Chr8461 47576 52443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8461g00004 69 141 Eukaryotic Initiation Factors Gene Family AT2G36660 31.081 7.82e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8461g00004 K14396 - gmx:100791351 321.627