Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8461g00002 ATGAATTTCCTTTTTGATCCACCAATTCAATGTAATGCCACATACTATGAATCCCCTAATAATAGTCCAATGTCCAACCTGGAGTTTGTTACCACAATTGAGGAAAAGGCCATCATCAAGTCCAAAGGAAGAAACACAAGTAGCAAGACAAAGGAGGAGGGCATCTTCCTGACATGGCAGGATTTGAGTGTCACTGTTCCAAATGGAAGGAATGGTAGGAAACCAATTCTTAAGGGTCTCACCGGTTATGCCAAGCCAGGTAAGCTCTTGGCAATAATGGGTCCTTCTGGCTGTGGCAAGTCCACACTTCTTGATGCTTTAGCAGGAAGACAAGTTTCAAGCACAAAGCAAACAGGGAAAATTCTGATAAATGGCCACAGACAAGCATTGGCTTATGGAACATCTGCATATGTGACCCATGATGATGCTGTGTTGACAACATTAACAGTTGCAGAAGCAGTGAACTACTCAGCTCATCTCCAATTTCCCGACTCAATGTCTAACAGAGACAAGAAAGAGAGAGCAGAGTTTACAATCAGACAAATGGGTCTACAAGATGCCATCAACACAAGGATTGAAGGGAAGGGTTCTAAAGGCCTTAGTGTGGGGCAAAAGAGGAGACTAGCCATTTGCATTGAGATTCTTACTAGCCCCAACCTTCTCCTTCTTGATGAACCAACTAGTGGCCTAGACAGTGCTGCTTCCTACTATGTCATGAGCAGAATTGCAAGTCTAAAGACAAGAGATAACATCAAAAGGACAATTGTTGTGTCCATCCATCAACCTAGTGAGACAGTTTATTTTGGCCCCACTTCTGCTGCAACAGAGTTTTTTGCTTCAAATGGCTTTCCTTGTCCACCTCTCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTCAAACTGGACGACGAGGATTATTTCCAAATAGCAGTACCCAAAGAAGAAGCAATTGATATCCTTGTGAAGTTTTATAAATCTTCTGAAATTAGTAACCTAGTTCAGAAGGAAGTAGCAGCAGTAGGTGAAAGTGCTAGAGGGGCACTGGTCTCTTTTGTTGCTTCAGTCCTGACTTTCATAACCCTTCTTGGTGGATTCCCTCCATTTGTGGAACAAATGAAGGTATTTGAAAGTGAGAGATTGAATGGGCATTATGGTGTTGCTGCTTTTGTCATTAGTCACACGTTATCTCCTATTCCATACATGGTACTAACGTCACTGATTCCTGGAGTGATCATATACTACCTTTCTGGACTTCACACAGGACTTGAACGTTGCCTATACTTTTCTTCTGTGCTACTTGCGTGCATCTTGTGGGTTGAGAGCCTCATGATGGTTGTTGCAAGTATCTTCCCCAATCCCAACACGGGTATCACTGTCTCCGGTGGAATTATGGGAATAATGATTTTAGCTGGTGGATTCTTTCGCCTGCCAAATGATCTTCCCAAACCATTTTGGAAATACCCCATGTACTATCTTTCCTTCCACAAATATGCCTTCCAGGGTTTGTTCAAGAATGAGTTCATTGGTTTCAATCTTGCTCGTGATCAAGATGGTGGTACCTACATAAGTGATCGACAAATACTAACAAAGATTTGGCAAGTGGAAATGGGTCACTCAAAGTGGGTTGATCTTGCTATCTTGCTGGGAATAATTGTTTTCTATAGACTTATGTTCTTGGCAATCATTATGGCCAAGGAGAAGATGAAGACTTGA 1725 0.4209 MNFLFDPPIQCNATYYESPNNSPMSNLEFVTTIEEKAIIKSKGRNTSSKTKEEGIFLTWQDLSVTVPNGRNGRKPILKGLTGYAKPGKLLAIMGPSGCGKSTLLDALAGRQVSSTKQTGKILINGHRQALAYGTSAYVTHDDAVLTTLTVAEAVNYSAHLQFPDSMSNRDKKERAEFTIRQMGLQDAINTRIEGKGSKGLSVGQKRRLAICIEILTSPNLLLLDEPTSGLDSAASYYVMSRIASLKTRDNIKRTIVVSIHQPSETVYFGPTSAATEFFASNGFPCPPLHNPSDHFLRIINKDFKLDDEDYFQIAVPKEEAIDILVKFYKSSEISNLVQKEVAAVGESARGALVSFVASVLTFITLLGGFPPFVEQMKVFESERLNGHYGVAAFVISHTLSPIPYMVLTSLIPGVIIYYLSGLHTGLERCLYFSSVLLACILWVESLMMVVASIFPNPNTGITVSGGIMGIMILAGGFFRLPNDLPKPFWKYPMYYLSFHKYAFQGLFKNEFIGFNLARDQDGGTYISDRQILTKIWQVEMGHSKWVDLAILLGIIVFYRLMFLAIIMAKEKMKT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8461g00002 574 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Mupr8461g00002 574 Pfam ABC transporter 77 228 IPR003439 GO:0005524
Mupr8461g00002 574 Pfam ABC-2 type transporter 349 511 IPR013525 GO:0016020|GO:0140359
Mupr8461g00002 574 Gene3D - 43 277 IPR027417 -
Mupr8461g00002 574 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 47 344 - -
Mupr8461g00002 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 267 IPR027417 -
Mupr8461g00002 574 SMART AAA_5 86 311 IPR003593 GO:0016887
Mupr8461g00002 574 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 300 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8461g00002 Mupr-Chr8461 11053 16236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8461g00002 76 263 Calmodulin-binding Proteins AT2G36910 27.461 5.14e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8461g00002 K05681 - gmx:100784793 914.835