Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8443g00002 ATGAAGTCTCGAACAAACAACAAACGAAACCTCCCACATTTGCAAGAACATAAAACACGCATACTTGGCTATTCCTCGGAAAATTTGGAAAACTCGCGAGAGATGAAGAGGGCAAGGGATGATATGTACTCTGCCTCTGCCTCTCAATTCAAACGCCCCTTTGCTTCATCACGTGCTGATTCCTATGGACAAAACCAAGTCCCTGGAAATGGAGGAGGAGGGGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGCAGGTGGTGGCAATGGAGGTGGTGTTGGTGGGGGAGCAACTACTTCCCAAAAACTGACTACCAATGATGCCTTATCCTATTTGAAGGAAGTCAAAGACATGTTTCAGGACCAAAGAGAGAAGTATGACATGTTCCTTGAGGTCATGAAAGATTTCAAAGCTCAAAGGACTGACACTGCTGGTGTCATAGCAAGGGTGAAGGAGTTATTCAAAGGGCACAACAATTTGATTTTTGGATTTAACACTTTCTTGCCAAAGGGTTATGAGATAACACTTGACGAGGATGAGGCTCCTCCAAAGAAAACAGTTGAATTTGAAGAAGCAATCAGTTTTGTGAACAAGATAAAGAAACGATTCCAAAGTGACGAGCATGTTTACAAATCATTCTTGGACATTTTAAATATGTACCGCAAAGAGCACAAGGACATTGGTGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGGACCATCGAGATTTGCTCGAGGAGTTCACTAGATTCTTACCAGATACTTCTGCTGCACCTTCCACACAGCATACTCCATTTAGTCGAAATTCATTGCAGCGCTTTAATGAGCGGAGTTCTATGACTCCGATGATCAGGCAAATGCCAGCAGACAAGGCACAACGTTATCGACGAGACAGACTTCCTTCTCATGATCGTGATGTAAGTGCTGAACGCCCTGAGCTAGATGATGACAAAACAATGATGAACATACACAAGGAGCAGAGGAAGCGTGAAAGTAGGGATAGGAGAATGCGTGATCCGGATGAGAGAGAACACGATCTTGATAACAGCAGGGATTTGAACTTGCAGCGGTTTCCTGACAAAAAGAAATCTGTCAAGAAAGCTGAAGGTTTTGGAATGGCTTCTGACTTTCCTTCTTATGATGACAAAGATACCTTAAAGAGCATGTATAGTCAAGCATTCAGTTTCTGCGAGAAAGTTAAGGAGAAGTTGAGCAGTTCTGATGATTACCAAACATTCTTGAAGTGCCTTCATATTTTCAGCAATGGAATAATTAAAAGGAATGATTTGCAAAATTTGGTAACTGATTTACTTGGAAAGCATCCAGATCTTATGGATGAATTCAATGATTTCTTGGAGCGTTGTGAAAATATTGATGGATTCCTTGCTGGTGTGATGAGTAAAAAGATAATGTTGTTGACATATGCTGAGTATTTTAAAGAGTATTATTTTCCCTATTTATCAATGGTTAATTCTGATATAGCAAAAATGTTGACTTCAGAGTCACTGGCTACTGATGCTCATTTATCAAGATCAGCAAAGTTGGAGGACAAAGACAAAGAGCACAAGCGGGATATAGATGGAGCTAAAGAGAAGGAAAGATACAGGGAGAAATACATGGGAAAATCCATCCAAGAACTTGACCTTAGTGACTGTAAACGCTGTACTCCCAGCTACCGGCTTCTGCCTGCAGATTATCCAATTCCTACAGCTAGTCAGAGATCTGAGCTTGGTGCTCAAGTATTGAATGACCATTGGGTATCTGTGACTTCAGGAAGTGAGGATTACTCTTTCAAACATATGCGCAGAAATCAGTATGAAGAAAGCTTGTTCAGATGTGAAGATGACAGATATGAGCTGGACATGTTATTAGAGTCTGTGAGTTCAGCTGCTAAACGTGCCGAGGAATTGTATAATAACATCAATGAAAATAAAATCAGTGTGGAGACTCCAAACCGTATTGAAGATCACTTTACTGTTCTAAATTTAAGGTGCATTGAACGTCTATATGGTGATCATGGTCTTGATGTTATAGACATATTGCGTAAAAACCCAACCCATGCCCTGCCTGTAATATTGACTCGACTGAAGCAGAAGCAAGAGGAGTGGAGTAGGTGTCGCTCAGATTTCAATAAAGTATGGGCTGAAATTTATGCTAAAAATCACTACAAATCACTTGATCATCCTTTGGTTGTGGAGATTAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGATATTATTCAGTCTATTGCGGCTGGAAATAAACAACCTCTAATTCCACATCTAGAATTTGAATATTCTGATGTTGGGGTTCATGAGGAGCTGTATAAACTTGTTCGTTATTCATGTGAGGAGTTATTCTCAAGTAAAGAGTTGTTAAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAGCCAATGCTTGGTGTTTCTTCCCAATCTCATGGGACAGAAAGGGTGGAAGACAGAAAAACTGGGCATAATTTTCGCAATTTTGTTGCACCAAATATAGGGGGTGACAGAAGCCCTCGTGGAGACTCTCTTTCAATTAATTCAAGGTTACCAAAATCTGATAAGAATGAAGCTGATGGTAGAGTAACTGAAGTGAAGAATGTTCACCGGACTAGTGTGTCAGCCAATGATAAAGAAAATGGATCTGTTGGTGGTGAACTTGTTTGTAGAGATGACCCGTTAATGGAAAAAGGGCAGAAAAATGTAGAATGCAATGATAAAGCCTCCGGATTTAGTAAACAACTTACCTCTGATGAACAAGGAGCTAAAAACAATGTATCAATTGCAATCAGAGGAGAAAACAGTCTCAACAGAACCAACTTCGATGCGTCTCCAGGCCGTGCCCTTACTCCATCCCGACCTACTGATGTTGATGACTCTGTAGCCAAGTCTCAGGGTGTTAATGTACCATCGGTGGAGGGATGTGAACTGGCAACTCCAGCACCAGTGGCCAATGGCGTTCTAAGTGAGAGCAGTAAAGTTAAAACTCATGATGAATCTGCTGGGCCTTGCAAAATTGAAAAGGAAGAGGGTGAGTTATCACCGAATGGTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGTGCAGTCAATGGCTAAGTCAAAGCACAACATTGAAAGAAGGAAATATCAGTCTAGAAATGGAGAGGATGAAATTTGTCCTGAGGCTGGAGGTGACAATGATGCAGATGCCGATGATGAGGACAGTGAAAATGTTTCCGAAGCTGGTGAAGATGTCTCAGGCAGTGAATCTGCTGGTGATGAATGCTTCCGGGAAGATCATGAAGAGGAGGAAGATATAGAACATGATGAGGTTGATGGTAAGGCTGAGAGTGAAGGTGAAGCTGAGGGGATCTGTGATGCACAAGCTGGAGGAGATGGCACATCTTTGCCATTGTCAGAGAGGTTCCTTTCATCCGTTAAACCTCTCACAAAGCATGTATCAGCAGTTTCATTTGTTGAAGAAATGAAGGACTCAAGGGTGTTCTATGGAAATGATGACTTCTATGTGCTTTTTAGACTTCATCAAACTCTTTACGAGAGGATTTTGTCAGCAAAAACAAATTCAATGAGTGCAGAAATGAAATGGAAAGCAAAAGATGCTAGTTCACCGGATCCTTATTCAAGATTTATGAATGCATTGTACAATTTGCTTGATGGATCTGCTGAAAATGCAAAGTTTGAAGATGAATGCCGAGCAATTATTGGGAACCAGTCATATGTGTTATTCACATTAGACAAGTTAATATACAAATTGGTCAGACAGCTTCAAACTGTAGCAACTGATGAGGTAGACAATAAGCTTCTCCAATTATATGAATATGAAAAATCTCGGAAGCCTGGGAAGTTAAATGATTCTGTATATCATGCAAATGCTCATGTCATCCTTCATGAGGAGAATATATACCGTTTGCAATGTTCCTCTACCTCTACCCCCTGTGGACTATCCATCCAGCTCATGGACAATATGAATGAAAAGCCTGAGTTGTTTGCCGTTTCAATTGATCCAAATTTCTCTTTTTATCTGCACAATGATTTTCTGTCTGTCTTTCCTGGCAAAAAGGAACCCAATGGCATTATACTGCATAGAAACAAACGCCAATATGGACACTTAGATGAGCTTTCAGCAATATGCTCTGCCATGGAAGGTGTTAAAGTAATTAATGGATTGGAATGTAAGATAGCTTGCAGCTCATCCAAGATTTCTTATGTTCTTGACACACAAGATTTTTTCTTCCGACCGAGAAAGAAAAGACGAACATCATCGGGGACTGCAAACTCCCGGTTTCGTAGGGATAGAGAGGAAAGATTCCGCAAATTGTTGGCATGCTCATAA 4362 0.4088 MKSRTNNKRNLPHLQEHKTRILGYSSENLENSREMKRARDDMYSASASQFKRPFASSRADSYGQNQVPGNGGGGGGGGGGGGGGAGGGNGGGVGGGATTSQKLTTNDALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHTPFSRNSLQRFNERSSMTPMIRQMPADKAQRYRRDRLPSHDRDVSAERPELDDDKTMMNIHKEQRKRESRDRRMRDPDEREHDLDNSRDLNLQRFPDKKKSVKKAEGFGMASDFPSYDDKDTLKSMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDLLGKHPDLMDEFNDFLERCENIDGFLAGVMSKKIMLLTYAEYFKEYYFPYLSMVNSDIAKMLTSESLATDAHLSRSAKLEDKDKEHKRDIDGAKEKERYREKYMGKSIQELDLSDCKRCTPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKRAEELYNNINENKISVETPNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNHYKSLDHPLVVEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGVHEELYKLVRYSCEELFSSKELLNKIMRLWSTFLEPMLGVSSQSHGTERVEDRKTGHNFRNFVAPNIGGDRSPRGDSLSINSRLPKSDKNEADGRVTEVKNVHRTSVSANDKENGSVGGELVCRDDPLMEKGQKNVECNDKASGFSKQLTSDEQGAKNNVSIAIRGENSLNRTNFDASPGRALTPSRPTDVDDSVAKSQGVNVPSVEGCELATPAPVANGVLSESSKVKTHDESAGPCKIEKEEGELSPNGDSEEDNFVAYGDSNVQSMAKSKHNIERRKYQSRNGEDEICPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECFREDHEEEEDIEHDEVDGKAESEGEAEGICDAQAGGDGTSLPLSERFLSSVKPLTKHVSAVSFVEEMKDSRVFYGNDDFYVLFRLHQTLYERILSAKTNSMSAEMKWKAKDASSPDPYSRFMNALYNLLDGSAENAKFEDECRAIIGNQSYVLFTLDKLIYKLVRQLQTVATDEVDNKLLQLYEYEKSRKPGKLNDSVYHANAHVILHEENIYRLQCSSTSTPCGLSIQLMDNMNEKPELFAVSIDPNFSFYLHNDFLSVFPGKKEPNGIILHRNKRQYGHLDELSAICSAMEGVKVINGLECKIACSSSKISYVLDTQDFFFRPRKKRRTSSGTANSRFRRDREERFRKLLACS 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8443g00002 1453 Gene3D Paired amphipathic helix 107 169 IPR036600 GO:0006355
Mupr8443g00002 1453 ProSiteProfiles PAH domain profile. 185 255 IPR003822 GO:0006355
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 49 68 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 255 282 - -
Mupr8443g00002 1453 PANTHER SIN3B-RELATED 100 1312 IPR039774 GO:0003714
Mupr8443g00002 1453 ProSiteProfiles PAH domain profile. 101 171 IPR003822 GO:0006355
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 1 83 - -
Mupr8443g00002 1453 Pfam Paired amphipathic helix repeat 408 452 IPR003822 GO:0006355
Mupr8443g00002 1453 Pfam Paired amphipathic helix repeat 208 252 IPR003822 GO:0006355
Mupr8443g00002 1453 Pfam Paired amphipathic helix repeat 124 168 IPR003822 GO:0006355
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 1063 1083 - -
Mupr8443g00002 1453 Pfam Sin3 family co-repressor 553 645 IPR013194 -
Mupr8443g00002 1453 Pfam C-terminal domain of Sin3a protein 1171 1420 IPR031693 -
Mupr8443g00002 1453 SUPERFAMILY PAH2 domain 99 170 IPR036600 GO:0006355
Mupr8443g00002 1453 SUPERFAMILY PAH2 domain 182 254 IPR036600 GO:0006355
Mupr8443g00002 1453 Coils Coil 512 532 - -
Mupr8443g00002 1453 SMART hdac_interact2seq4b 551 651 IPR013194 -
Mupr8443g00002 1453 Coils Coil 624 644 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 1043 1062 - -
Mupr8443g00002 1453 SUPERFAMILY PAH2 domain 389 455 IPR036600 GO:0006355
Mupr8443g00002 1453 Gene3D Paired amphipathic helix 184 256 IPR036600 GO:0006355
Mupr8443g00002 1453 ProSiteProfiles PAH domain profile. 386 455 IPR003822 GO:0006355
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 815 867 - -
Mupr8443g00002 1453 Gene3D Paired amphipathic helix 384 457 IPR036600 GO:0006355
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 997 1018 - -
Mupr8443g00002 1453 FunFam Paired amphipathic helix SIN3-like protein 184 255 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 993 1123 - -
Mupr8443g00002 1453 FunFam Paired amphipathic helix protein Sin3 107 169 - -
Mupr8443g00002 1453 FunFam Paired amphipathic helix protein SIN3 383 457 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 1099 1114 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 255 357 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 290 357 - -
Mupr8443g00002 1453 MobiDBLite consensus disorder prediction 942 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8443g00002 Mupr-Chr8443 11946 22482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8443g00002 86 204 WRKY Transcription Factor Family AT4G12020 50.833 9.16e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr8443g00002 Sin3a_C 2.7e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8443g00002 K11644 - gmx:100807181 2429.05