Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr843g00002 ATGAAGGATTTGCGAAGTGCTGTGCAGGATTGCAACTTAACAGTTTCGACCGTCCCAGAAAAGGGTCGTTCTCTCTTCGCTGATAGGGATTTCTATCCAGGGGAGGTGATTATAAGTCAAGAGCCTTATGTTTATGTTCCAAATAACTCGTCTGTCACGGCGCAGAAAAGGTGCGATGGATGTTTCACTACAACTAATGTCCTCAGCAGGTGCTCACGTTGCCAAGTTGCATGCTATTGTGGAACCGCATGTCAGAAGTCAGAGTGGAAGCTGCATCGTCTTGAGTGTGAGGTCCTCTCCAGGCTGGACAAGGACAAGAGAAAATCTGTCACCCCATCCATTCGGCTCATGGTGAGACTTTATCTTCGGAGGAAGTTGCAAAATGATAAGATTATCCCAAGCACTGCTATGGACAACTACAACTTGGTGAATGAATTAGTGGCTCACATGTCTGATATCACTGAGGAGCAGCTGGTGCTTTATGCACAGATGGCTAATCTTGTATACTCCATACTACAATGGCCAGAAATCAATATAAAAGAGATAGCAGAAAGTTTTTCTAAGTTTGCATGTAATGCGCATACCATTTGTGACAGTGAGTTGAGACCTGTGGGAACAGGATTGTATCCTGTTATTTCCATTGTCAATCACAGTTGTTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCACTGGTACGTGCTGTGCAGCATATACCAACAGGTACCGAGGTACTGATAAGTTATATAGAAACTGCTGGAAGCACTATGACTCGACAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGCACTTGTCCCCGCTGTTCTAAAGTGGGTCAATATGATGATATCCAAGAAAGTGCAATTCTAGAAGGATACAGATGCAAAAGTGACAAATGTGGTGGTTTCTTGCTTCGTACAACTGATGGGAAAGGATTCCAATGCCAAGGTTGTGGACTAGTTAGGGACAAGGAGGAGATAAAGAGAATTGCAACTGAAATTAAATTGCTATCTGAAGAAGCTTCTAAGTCTTCTTCCACTTGCAATTATCAAGAATCTATTTCCATATATAAAAGGATTGAGAAACTGCAAAGAGAACTCTATCATCCTTTCTCAATCAACTTGATGCAAACTAGAGAGAAGATTTTAAAGTCCTTAATGGAGCAGGAACACTGGACAGAAGCTTTAGCATATTGCAAATTGACCATACCATTCTATCAAAGAGTGTATCCAGCTGTCCACCCTCTGCTTGGCTTGCAATATTATACTTGTGGAAAACTAGAATGGTATCTGGGAGACACAGAGGAAGCTGTTAAATCACTGGCAAAGGCTGTGGATATACTACGGATTACACATGGCACAAATACGCATTTCATGAAGGAGCTCTTGATGAAGTTGGAAGAAGCCCGTGCCGAAGCGTCTTACAAATTGTCCTCTGAAGAGTAG 1452 0.4256 MKDLRSAVQDCNLTVSTVPEKGRSLFADRDFYPGEVIISQEPYVYVPNNSSVTAQKRCDGCFTTTNVLSRCSRCQVACYCGTACQKSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQNDKIIPSTAMDNYNLVNELVAHMSDITEEQLVLYAQMANLVYSILQWPEINIKEIAESFSKFACNAHTICDSELRPVGTGLYPVISIVNHSCLPNSVLVFEGRSALVRAVQHIPTGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKVGQYDDIQESAILEGYRCKSDKCGGFLLRTTDGKGFQCQGCGLVRDKEEIKRIATEIKLLSEEASKSSSTCNYQESISIYKRIEKLQRELYHPFSINLMQTREKILKSLMEQEHWTEALAYCKLTIPFYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEEAVKSLAKAVDILRITHGTNTHFMKELLMKLEEARAEASYKLSSEE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr843g00002 483 Gene3D Tetratricopeptide repeat domain 404 481 IPR011990 GO:0005515
Mupr843g00002 483 Pfam SET domain 22 250 IPR001214 GO:0005515
Mupr843g00002 483 Gene3D - 57 108 - -
Mupr843g00002 483 SUPERFAMILY SET domain 7 250 IPR046341 -
Mupr843g00002 483 Coils Coil 322 342 - -
Mupr843g00002 483 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 470 - -
Mupr843g00002 483 ProSitePatterns Zinc finger MYND-type signature. 58 96 IPR002893 -
Mupr843g00002 483 ProSiteProfiles SET domain profile. 11 251 IPR001214 GO:0005515
Mupr843g00002 483 Gene3D - 109 193 - -
Mupr843g00002 483 SUPERFAMILY TPR-like 348 449 IPR011990 GO:0005515
Mupr843g00002 483 Gene3D SET domain 24 277 IPR046341 -
Mupr843g00002 483 SMART set_7 11 257 IPR001214 GO:0005515
Mupr843g00002 483 ProSiteProfiles Zinc finger MYND-type profile. 58 96 IPR002893 -
Mupr843g00002 483 Pfam MYND finger 58 96 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr843g00002 SET 3.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr843g00002 K11426 - gmx:100789518 863.603