Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8438g00005 ATATTATTATATTTAGTTACATATATTCTCTCCGATTGGATTCGATCGTCTATCTCCTCCTCCTTCTCCTTTTTCTTCTTATTCATCTTCAATTCTCCTCTAGCTGTCACCGTGTTTGTTCGCATGGAGAACGACACCGCCGCCGCCGCCGCCGCCGCAAACAATAACACTACCGCCATCACCGTCAGCGCGAAAGTAGGTTCCGGAGGAGGAGTGAAATCGAACAATCATAACCAAGAAGAAGAGCATTCGAATTTGAACGGCGAGGAGCACATGGCAGAGCAAGTGGAGGCAGAAGAAGTGGAAGATCGAGAAGCAGATGAAGACGAAGGAGAACCAACTGGATCTGCGCCCAACCCTCGCCAACCTTCCAGAACCCCTTTCACTAATCTCAGCCAGGTTGATGCTGACCTAGCCCTAGCCCGAACCCTTCAGGAGCAGGAAAGGGCATATATGATGCTGAGAATGAATAATGAAGGAAGTGATTATGGAAGTTGGGATGGAAGCTATCCCCATGATGATGGGGATGATTTTGATGATCTACATGATGGCACTGATCTGGATGAGGATGATGATGAAGATGATGATGATGATAATGAGGAGTATGATGAGGATGAAGATGCATTTGATGTCCATGCTCATGCTAGTGCTGGAGAACATGATAATCCCAGCATTGAATTTGACCCAGATGTATTTTCAAGTGATGAAGCATATGCAAGAGCATTACAAGAAGCTGAAGAGAGGGAAATGGCAGCTAGACTGTTGGCTCTTGCTGGGATAAATGATCGGGAGGTGGAGGACATAGAAGAGGAGCATGGTGCTAATTCTCAGGATGCTTGGGAGGATGTTGATCCAGATGAACTTTCATACGAGGAATTATTGGCATTGGGCGAAGTAATTGGAACTGAAAGCAGAGGTCTTTCAACTGATACTATTGCCTGTTTGCCTTCAGTCAACTACAAGATTGGGAGTGATCAGCATGGAAGCAATGATTCGTGTGTCATTTGCCGGATGGACTATGAGGATGGGGAGTCCTTGACAGTTCTTTCCTGCAAACATCTGTACCATCCTGAGTGCATTAACAATTGGTTGAAAATAAACAAGGTTTGCCCAGTTTGTAGTACCGAGGTATCTGCTTCTGGGAGCAACTTGTAG 1155 0.4563 ILLYLVTYILSDWIRSSISSSFSFFFLFIFNSPLAVTVFVRMENDTAAAAAAANNNTTAITVSAKVGSGGGVKSNNHNQEEEHSNLNGEEHMAEQVEAEEVEDREADEDEGEPTGSAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWDGSYPHDDGDDFDDLHDGTDLDEDDDEDDDDDNEEYDEDEDAFDVHAHASAGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREVEDIEEEHGANSQDAWEDVDPDELSYEELLALGEVIGTESRGLSTDTIACLPSVNYKIGSDQHGSNDSCVICRMDYEDGESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8438g00005 384 MobiDBLite consensus disorder prediction 67 131 - -
Mupr8438g00005 384 SUPERFAMILY RING/U-box 324 378 - -
Mupr8438g00005 384 MobiDBLite consensus disorder prediction 161 204 - -
Mupr8438g00005 384 SMART ring_2 333 373 IPR001841 -
Mupr8438g00005 384 Pfam Ring finger domain 331 373 IPR001841 -
Mupr8438g00005 384 ProSiteProfiles Zinc finger RING-type profile. 333 374 IPR001841 -
Mupr8438g00005 384 FunFam E3 ubiquitin ligase BIG BROTHER-related 299 380 - -
Mupr8438g00005 384 MobiDBLite consensus disorder prediction 76 98 - -
Mupr8438g00005 384 MobiDBLite consensus disorder prediction 179 204 - -
Mupr8438g00005 384 MobiDBLite consensus disorder prediction 117 131 - -
Mupr8438g00005 384 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 76 382 IPR043312 -
Mupr8438g00005 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 298 380 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8438g00005 Mupr-Chr8438 18905 24897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8438g00005 114 271 C3H Transcription Factor Family AT3G19910 54.037 7.25e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8438g00005 K19045 - gmx:100306465 472.626