Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8437g00001 ATGATCAACACTGTAAACGGCAGTTTCCATTTCATTGTCAAAGCAAGCACGCCCCACTCCTACTACCACATCCCAACCATAGGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACACCAAGACCTACAAAAAGGCTACATGGATCATCTGTTTACACACTCAAGGAGATGGAAGAGGCGACATGTTCATTCAGCGATGAGAATCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAACGTGAGTTTCGTGTTGAAGTTGACATCTTGAGCAGACTTGACCATCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATACGAATATATGCATAAAGGGAACCTGCAAGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCAAAGACTCCATGTGGCACTGGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGATATCTGATTTTGGGCTAGCAAAGTTAATGCCAGAAGGACAGGAGACACTTGTGACAGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCCGAGTATACCTCGACTGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCTGTAGATCTAAACCAAGGTCCCAATGATCAAAACCTTGTACTACAGGTGAGGCACATACTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTATACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTCCGAACTGAGAGTAATGAGAGACCTTCAATGGCAGAATGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGATGCCAGCCAATGCCCCTCCTGAAGAGAATTACCAGAAAAATACACTTAGAAAGTTAGTTACATTCAGGTTTTCCATTTTCCCTACTCAAATTGCTACTGATGAAAATGTTTACCTTGCCACGAGAATGAAGCAAGGTAAAATTGCAGAAGGCGGATAA 1230 0.422 MINTVNGSFHFIVKASTPHSYYHIPTIGVYKPAQLWQLEDQTPRPTKRLHGSSVYTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHKGNLQDHLNGIGERNMDWPQRLHVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETLVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLMIIYTNSKGLGMMPANAPPEENYQKNTLRKLVTFRFSIFPTQIATDENVYLATRMKQGKIAEGG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8437g00001 409 Gene3D Phosphorylase Kinase; domain 1 36 145 - -
Mupr8437g00001 409 Gene3D Transferase(Phosphotransferase) domain 1 146 355 - -
Mupr8437g00001 409 Pfam Protein kinase domain 68 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8437g00001 409 SUPERFAMILY Protein kinase-like (PK-like) 53 359 IPR011009 -
Mupr8437g00001 409 FunFam receptor-like serine/threonine-protein kinase NCRK 146 356 - -
Mupr8437g00001 409 ProSiteProfiles Protein kinase domain profile. 67 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8437g00001 409 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Mupr8437g00001 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mupr8437g00001 409 PANTHER OS01G0750732 PROTEIN 47 349 - -
Mupr8437g00001 409 CDD STKc_IRAK 73 344 - -
Mupr8437g00001 409 FunFam serine/threonine-protein kinase PBS1-like 35 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8437g00001 Mupr-Chr8437 4400 10744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8437g00001 50 348 Receptor kinase-like Gene Family AT3G58690 46.711 1.61e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Mupr8437g00001 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8437g00001 - - gmx:100777910 645.58