Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8408g00001 ATGGCTAATTCTCCTTCGTCCTTGTCTTCGCATAATGCTTCATCTTCAATAATATTGATTGTGGCAATTCTCATCTTTTGCATGTCACATTGCGCTCTTGGCCTAGATGGACAAACAGTCGCAGATTCTCCTATGTTAACCGAAAGGTTAGAAATCAATCGCACTATCAAAGTAGATATCAACGGTAATGGGGAGTTCAAATCTATCCAAGCTGCCATTGATTCCATTCCTGAAGGAAATTCTAATTGGGTTATCGTCCATGTTAGGAAAGGAATATACAGAGAAAAGGTGCACATACCAAAGAACAAGCCTTTTATATTTATGAGAGGGAATGGAAGAGGAAAAACTGGCATAGTTTGGTCTCAGAGCTCTGAAGACAACATAGCTTCTGCTACCTTCAGAGCCGAAGCGCACGACTTCATTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCTACGGGGGTTGCCTATACCTCACAAAACCAATCAGTGGCAGCATTTGTGGCAGCAGACAAAGTGGCATTCTATCATTGCGCCTTTTACAGCACTCATAACACTCTCTTCGATCACAAAGGCAGACATTACTATGATGCTTGCTACATTCAAGGTTCAATTGATTTCATATTTGGCCGTGGCAGAACCATCTTCCATAATTGTGAGATATTTGTGATTGATGACAAAAGGGTCAAGATTCATGGTTCAATAACGGCTCACAATAGGGAAAATGAAAGTGAGATGAATGGGTTTATCTTCATCAAAGGCAAGGTTTATGGTATTGGTGCGGTGTACCTAGGAAGGGCCAAGGGTCCTTATTCTAGGGTCATTTTTTCTGAAACGTATCTCTCCATGACCATTGACCCAGAAGGGTGGACCAATTGGAGCTATGACGGTAGCACAGAAAATCTATACCATGCGGAGTACAAATGCCATGGACCTGGAGCCTCTGTGGGGAGACGCGCTCCTTGGTCGAGGCAGCTAACTGAGGAAGAAGTTGCTCCATTTGTATCCATTAATTACATTGATGGCAAGAATTGGTTGCCAGTATGG 1047 0.4288 MANSPSSLSSHNASSSIILIVAILIFCMSHCALGLDGQTVADSPMLTERLEINRTIKVDINGNGEFKSIQAAIDSIPEGNSNWVIVHVRKGIYREKVHIPKNKPFIFMRGNGRGKTGIVWSQSSEDNIASATFRAEAHDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDHKGRHYYDACYIQGSIDFIFGRGRTIFHNCEIFVIDDKRVKIHGSITAHNRENESEMNGFIFIKGKVYGIGAVYLGRAKGPYSRVIFSETYLSMTIDPEGWTNWSYDGSTENLYHAEYKCHGPGASVGRRAPWSRQLTEEEVAPFVSINYIDGKNWLPVW 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8408g00001 349 Gene3D - 49 348 IPR012334 -
Mupr8408g00001 349 ProSitePatterns Pectinesterase signature 2. 201 210 IPR033131 -
Mupr8408g00001 349 SUPERFAMILY Pectin lyase-like 53 348 IPR011050 -
Mupr8408g00001 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 346 - -
Mupr8408g00001 349 FunFam Pectinesterase 50 349 - -
Mupr8408g00001 349 Pfam Pectinesterase 57 342 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8408g00001 Mupr-Chr8408 944 2522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8408g00001 14 346 Carbohydrate Esterase AT5G47500 34.831 1.29e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8408g00001 - - gmx:100792967 600.897