Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8406g00005 ATGGGTTCCAGTCGCTCACGTGGCTCTGCCACTGCCAAAGAACGCCTACGCTGGACACAACAACTCCATGATGGTTTTGTGGAGGCTGTAAATAGACTTGGGGGCCCTGATAGGGCAACACCAAAAGGTATATTGAAAGGAATGAAGGGTATGGGTGTTTCAGAGTTAACCATTTACCACGTGAAAAGCCATTTGCAGAAATACAGAATCTCCAAGTTGATTCCGGAGTCCCCTACAACTAATTTAACACTGATAGCACTAAATTCATGTGAATTTATAATTGGTTTTTTAATCATTTATGAAGGAGGAAAGCTTGAAAAAAAAAGCATATCAGATATACTGCCAAATTTTATTTTTGAATCCATTAAAATATTAATTATACTTTTATTATTAATTGCTCTGCAACTAAAGGAAGTCCTTCAAATACAGACAGAGATGCAAAATCGCTTGAGTGATAAAACAGAGGTTCAGAGAAGCTTGAGACTAAAAATTGAAGCACAAGGAAAGTACTTGGACAGAATTGAACAAAGCAATCATAACAAAACAATAATTGGAAAAGCATGCAAGGGTTTTGCTGTGAGAACTGCAGCTCTGCCTTCTCTTTCTGAGGAATCTGAATCTCTGGAAACAGAGCATAGATCAGCCAAAAAGCAAAGGGTTGCAGAAGAGGGTGAATTTCCAACAAGTTTTGAGCATGCACCATGCACCCCAACAGAATTCTACAACCAAACCTGGAATCTTTCTTGGAGTCAGCTTGCAGCAGCATGCCAATCACCTTTGGAATCGTGCCTATTGAGATCTCTCCTCTGA 810 0.3963 MGSSRSRGSATAKERLRWTQQLHDGFVEAVNRLGGPDRATPKGILKGMKGMGVSELTIYHVKSHLQKYRISKLIPESPTTNLTLIALNSCEFIIGFLIIYEGGKLEKKSISDILPNFIFESIKILIILLLLIALQLKEVLQIQTEMQNRLSDKTEVQRSLRLKIEAQGKYLDRIEQSNHNKTIIGKACKGFAVRTAALPSLSEESESLETEHRSAKKQRVAEEGEFPTSFEHAPCTPTEFYNQTWNLSWSQLAAACQSPLESCLLRSLL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8406g00005 269 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
Mupr8406g00005 269 FunFam Two-component response regulator 9 73 - -
Mupr8406g00005 269 Coils Coil 198 218 - -
Mupr8406g00005 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Mupr8406g00005 269 Gene3D - 12 73 - -
Mupr8406g00005 269 Pfam MYB-CC type transfactor, LHEQLE motif 135 176 IPR025756 -
Mupr8406g00005 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Mupr8406g00005 269 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Mupr8406g00005 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 236 IPR044848 GO:0003700
Mupr8406g00005 269 MobiDBLite consensus disorder prediction 202 225 - -
Mupr8406g00005 269 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8406g00005 Mupr-Chr8406 31813 36840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8406g00005 3 227 G2-like Transcription Factor Family AT4G28610 36.000 2.74e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr8406g00005 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8406g00005 - - psat:127127459 259.996