Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8398g00001 ATGATGATATTAAGAAACCTGGGGCCATTTGTGCCTATTATTAAAGAAGCATGGGAAAAAACAATAGTTGTTTCTAAGTTCTTGTGTTTTCTACACGTTACCAACACCTATCTGATCGGCTCTGTTACAACCTATGGTCCTAGCATGCTTCCTGCAATTGATTTGACAACAAATATGTTCTTAATGGAAAGGATCTCAACCCGGTTTGGTAAAGTTGCTCGTGGAGATATTGTAGTCTTGCGCCATCCTCAAGACCCCAGACGTTTCATGACCAAACGTGTGGTTGGATTGGAAGGTGACAGTGTTACATACATTTCCAATCCTGAGGCTTGTGGACTGGAGGGTGATAAGCATGAGACAATTGTGGTTCCACAGGGTCGCGTTTGGGTAGAGGGAGATAACAAGTATAAGAGCTATGATTCAAGAAAATTTGGTCCTGTTCCTTATGACCTTATTCAGGGAAAGATATATCGCCACTTAAAGATTTTGGACCTTTCTGGAATAAATGATATGAAGCAAAGCATTCAATCA 531 0.4068 MMILRNLGPFVPIIKEAWEKTIVVSKFLCFLHVTNTYLIGSVTTYGPSMLPAIDLTTNMFLMERISTRFGKVARGDIVVLRHPQDPRRFMTKRVVGLEGDSVTYISNPEACGLEGDKHETIVVPQGRVWVEGDNKYKSYDSRKFGPVPYDLIQGKIYRHLKILDLSGINDMKQSIQS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8398g00001 177 PRINTS Bacterial leader peptidase 1 (S26A) family signature 123 142 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr8398g00001 177 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr8398g00001 177 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr8398g00001 177 NCBIfam signal peptidase I 27 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr8398g00001 177 ProSitePatterns Signal peptidases I signature 3. 128 141 IPR019758 GO:0004252|GO:0016020
Mupr8398g00001 177 Gene3D Umud Fragment, subunit A 34 167 - -
Mupr8398g00001 177 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 12 161 - -
Mupr8398g00001 177 SUPERFAMILY LexA/Signal peptidase 36 158 IPR036286 -
Mupr8398g00001 177 Pfam Signal peptidase, peptidase S26 119 156 IPR019533 GO:0004252|GO:0006465
Mupr8398g00001 177 Pfam Signal peptidase, peptidase S26 27 104 IPR019533 GO:0004252|GO:0006465
Mupr8398g00001 177 CDD S26_SPase_I 42 156 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8398g00001 Mupr-Chr8398 9159 10188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8398g00001 49 156 MADS-box Gene Family AT1G29960 46.296 1.08e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8398g00001 K09647 - gmx:100805997 218.009