LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8397g00004	ATGACGCCCACCTTCATCCTCACCCTTCTTCATTGCCCACCCATCAAGTCACCCAACTTCACACATCTTTCAACGACCTCACTTTACTTCAACCACGAGTTTGTTACTGTGGTGCTCCTCTCTCCAATGACGCCGGAAAGTGACGTCACGCCCCCGTCCTTCAGGCTCCGCTGGGATGTGTTCCTGAGCTTCAGGGGCACCGACACGCGCCACACCTTCACGATGGCCCTCTACGACGCGCTGCACAGCCACGGCATCCGGGTGTTCCGCGACGACGACGGGTTGGAGCGCGGCGACGAGATCCAGAAGAAGCTTCTGGAAGCCATCGATGATTCAGCGGCGTCCGTGATCGTTCTGTCCCCCGATTACGCGTCCTCGCATTGGTGTCTCGACGAACTGGCCAAGATTTGCGAGTGTGGGAGGCTGATCCTTCCCGTATTCTACATGGTCGACCCTTCCCATGTCAGAAACCAAAAGGGTCCCTTTGAGGAGTCCTTTAGATTTCATGCAAACAGGTTTCCTCAAGAGAGCCTCCAGCTCTGGAGGGATGCCATGAAAAAAGTCGGAGGACTCGCTGGTTATCTTCAAATGTTTCTTTTTTTTGACAGCGATAGTGTTAAGAGTGATGACATCATTCGGCGTGTGGAGCAAGACCTTCTAAAGAGGATGAGGAATACACCATTGAGTGTGGCTCCATATACAGTTGGGCTCGAAGAAAGAGTTGAAGAGTTGAAAAAGCTGTTAGATGTAAAATCCAACGACGTAAGGGTTTTGGGGTTGTATGGAATGGGTGGGGTTGGTAAGACAACCTTAGCCAAGAGCCTCTTCAACAACCTCATTGTTTATAATTTCGAGGGACGCGGCTTCATTCCAAATGTTAGATCACAAGTCTCAAAACAAGATGGTATGGTTTCTCTTCAAAACACAATTAGTAGCTATCTTTCCCGTGGCGGAAAAGAGGGTCTAATCAACGACGTCAATGATGGTATTTCTGCTATCAAAAGAACGGTACAAGAGAAACGAGTTCTGTTGATCTTAGACGATGTTAGTGATGTGCAACAGCTTAACTTTTTGATGGGTAAGAGGGAATGGTTTTACAAAGGAAGCCGTGTTGTGATAACCACAAGGGATAGGGAAATTTTGTCTGAGAGTTATGTTGATGTGGTTTATGAGGTGAAAGAATTGGAACTCTCTTCAGCAATGGAATTGTTTTGTTACCATGCAACGGGAAAAAAGAAAGCTGGAGAGGATTTTGTGGACATTTCAAAGCAAATTGTGGAGAAGACAGGAGGGTTGCCTTTGGCTTTAGAAGTTTTTGGGTCTTTCCTGTTTGACAAGAAGACGGTGACAGAATGGAGAGATGCGTTGGAGAAGCTGAAGCAGATTCGTCCTGCGTGTCTTCATGATGTGCTGAAAATAAGCTTTGATGCGTTGGATGAACAGGAGAGGTGTGTGTTCCTTGACATAGCTTGTTTGTTTGTGCAGATGGAAATGAAGAGAGATGATGTGGTTGATGTGTTGAATGGGTGTGGTTTTAGAGGAGAGATAGCACTCACTGTGCTCACTGCGAGATGTCTGATTAAAGTTGGTGGTAATGGGAACCTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTGAATGCCGAAAGCCTTACAGATCCTGGTCAACGTAGCAGGCTCTGGGATCGTGCTGAAATCTTGACTGTCTTGAACAGTATGAAGGTAAATATTTGTTTTTATATGGAAGGAGAAACCAAAAGACAAACTAAAAAGGTAAAGAACTAG	1794	0.4632	MTPTFILTLLHCPPIKSPNFTHLSTTSLYFNHEFVTVVLLSPMTPESDVTPPSFRLRWDVFLSFRGTDTRHTFTMALYDALHSHGIRVFRDDDGLERGDEIQKKLLEAIDDSAASVIVLSPDYASSHWCLDELAKICECGRLILPVFYMVDPSHVRNQKGPFEESFRFHANRFPQESLQLWRDAMKKVGGLAGYLQMFLFFDSDSVKSDDIIRRVEQDLLKRMRNTPLSVAPYTVGLEERVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNNLIVYNFEGRGFIPNVRSQVSKQDGMVSLQNTISSYLSRGGKEGLINDVNDGISAIKRTVQEKRVLLILDDVSDVQQLNFLMGKREWFYKGSRVVITTRDREILSESYVDVVYEVKELELSSAMELFCYHATGKKKAGEDFVDISKQIVEKTGGLPLALEVFGSFLFDKKTVTEWRDALEKLKQIRPACLHDVLKISFDALDEQERCVFLDIACLFVQMEMKRDDVVDVLNGCGFRGEIALTVLTARCLIKVGGNGNLWMHDQVRDMGRQIVNAESLTDPGQRSRLWDRAEILTVLNSMKVNICFYMEGETKRQTKKVKN	597

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8397g00004	597	PRINTS	Disease resistance protein signature	429	443	-	-
	Mupr8397g00004	597	PRINTS	Disease resistance protein signature	257	272	-	-
	Mupr8397g00004	597	PRINTS	Disease resistance protein signature	336	350	-	-
	Mupr8397g00004	597	SUPERFAMILY	"Winged helix" DNA-binding domain	468	573	IPR036390	-
	Mupr8397g00004	597	SUPERFAMILY	Toll/Interleukin receptor TIR domain	55	194	IPR035897	-
	Mupr8397g00004	597	ProSiteProfiles	TIR domain profile.	56	219	IPR000157	GO:0007165
	Mupr8397g00004	597	Gene3D	-	223	389	IPR027417	-
	Mupr8397g00004	597	SMART	till_3	57	191	IPR000157	GO:0007165
	Mupr8397g00004	597	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	59	579	IPR044974	GO:0006952
	Mupr8397g00004	597	Gene3D	-	54	222	IPR035897	-
	Mupr8397g00004	597	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	222	489	IPR027417	-
	Mupr8397g00004	597	Pfam	NB-ARC domain	238	462	IPR002182	GO:0043531
	Mupr8397g00004	597	Pfam	TIR domain	58	225	IPR000157	GO:0007165
	Mupr8397g00004	597	Gene3D	-	395	479	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8397g00004	Mupr-Chr8397	44369	47307	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8397g00004	235	592	WRKY Transcription Factor Family	AT5G45050	30.726	3.41e-49	182

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr8397g00004	-		-	gmx:100784137	842.032