Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8397g00002 ATGAGCCAGCGCGTCCCTTCGTCGCGAACGGTTCGACTCGGCGGAGTCCAGCCTCAAGCCCCCGGTCACCGCACCATCTTCTGCAACGATCGCCAAGCCAACCTTCCTGTTCGCTTCAAGGGGAATTCAATATCGACTACAAAGTACAACTTTTTCACTTTTCTGCCAAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTACTTCCTTTCAATATCAATTTTGTCAACCACACCAATCAGCCCTGTGTCTCCAATAACTAATGTGCTTCCTCTGTCTCTGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGATTGGAAGCGTTTTCAAAATGACATGGTTGTAAACAATAATATGGTAGATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGTGATGTTGTCAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATTTGCTTTTCCTGGCTAGTACGAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTAAAGATTAGGAAATCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACCGGAAATCTTTTAATTCAAAACCAAATACTTCCTGTCAATCCAAACCAACTTTTGTTGCGAGGATGCAGTCTTAGGAATACAGAGTATATTGTTGGGGTTGTCATTTTTACAGGACATGAAACAAAGGTGATGATGAATGCCATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTTGCTCTATTTGTGACTCTCTTTGTTATGTGTTTCATTGGAGCTGTAGGCAGTGCTATCTTTGTAAACAAGAAGTATTTCTATTTACATCTTGAATCATCAGAGGAGGGCTCAGGACAGTTCAACCCAAGAAACAGATTTTTGATGATCAAATTTATTCAGTCCACTCAATTTATCAACAAGGATTTGCACATGTACCATTATGAAACTAATACCCCAGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCAGACAAAACTGGCACTCTAACAAGAAACTTAATGGAGTTCTTTAAATGTTCAATTGGAGGAGAGGTCTATGGAAACGGCGTGACTGAAATTGAGAAGGGAATAGCAGAGCGTAGTGGCTTAAAACTTGAGGAAAATATATCAATCAATGCATTGCGAGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCTGAGGGTGATGAAACCCCCGAGAAGATCAAATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTTTTCTTTTTCAGACGCACTCCTACAATGATATATATTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAGGATGTATCGTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACCGTAATATATGAGAGATTAGCTGATGGTTATAATGATATAAAAAAAGTTACTAGGGAACATTTGGAGCAATTTGGGTCTTCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAACTTCAAGAGGGAGTACCAGCCTGCATAGAGACTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTTACAGGGGACAAGGTTGAAACAGCAATTAATATTGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAAACTGATGTGATTAGAGAAGTTGAAGACAGGGGGGACCAAAGAGAAATTGCACAATTTATTAAAGAAGAAGTGAAGAAAGAACTGAAGAGGTGCCTTGAAGAAGCACAGAGCTATTTTAGCTCTCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTCATGCTACTGAATTTGAGCATGAACTGCCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTTAAGAAGGGTGCACGGAAAATAACACTTAGCATTGGTGACGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTATTGGCATAAGTGGGTTGGAAGGGATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCTCAGTTTAGTTACCTTGCGGATTTACTTTTGGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAACCTCACATTCACTCTTACTCAGTTTTGGTTTACCTTTCAAACTGGGTTTTCTGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACTGCACTTCCTGTGATCATTGTTGGACTATTTGATAAGGATGTCAGTGCATCTCTATCCAAGAAGTATCCTGAACTATACAGGGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTCTACCAGTCACTTATATTCTTCTATTTTGTGAGTTCATCAAGTTTAAGTGCTAAAAATTCAGCAGGAAAGATATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAGTAACCGTTAACCTGCGACTTCTTATGATTTGTAATTTAATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGTCTTTATATATACTGGGATCAGCACTCCTTATGATCGGCAGGAGAATCTGTATTTTGTCATATATGTACTGATGAGTACATTATATTTCTACCTCGCGTTACTTCTTGTTCCTGTTGTGGCACTTTTTGGTGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCATAGAGACGAGAGTGATGACACCAGCAGGGTGCAACTTCTAGAGATAGGGAGCCAGCTTACTCCATCAGAGGCTAGGAGCCATGCCATATCTCAACTCCCACGTGAGATATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGTTACGAGTCATTTTTTGCCGCACAGCTTGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCGAGGCGAGCTAGCATGAGATCTCGGCCAAAGATTGGACAAAAAAATAATTTTGTATATTTTGTCATTCTTCCCTCTTTCCAATTGTTTCTTTTGAGGGAA 3597 0.4026 MSQRVPSSRTVRLGGVQPQAPGHRTIFCNDRQANLPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMVVNNNMVDVLQDQKWVSIPWKKLQVGDVVKVKQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKSLEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQNQILPVNPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFVTLFVMCFIGAVGSAIFVNKKYFYLHLESSEEGSGQFNPRNRFLMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIEKGIAERSGLKLEENISINALRERGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDETPEKIKYQAASPDEAALVIAAKNFGFFFFRRTPTMIYIRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGYNDIKKVTREHLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKVETAINIAYACNLINNEMKQFIISSETDVIREVEDRGDQREIAQFIKEEVKKELKRCLEEAQSYFSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSMNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDFAIAQFSYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNVFFKWRVVAIWAFFSVYQSLIFFYFVSSSSLSAKNSAGKIFGLWDVSTMAFTCVVVTVNLRLLMICNLITRWHYISVGGSILAWFIFVFIYTGISTPYDRQENLYFVIYVLMSTLYFYLALLLVPVVALFGDFVYQGVQRWFFPYDYQIIQEMHRDESDDTSRVQLLEIGSQLTPSEARSHAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMRSRPKIGQKNNFVYFVILPSFQLFLLRE 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8397g00002 1199 Gene3D - 642 849 IPR023214 -
Mupr8397g00002 1199 NCBIfam HAD-IC family P-type ATPase 782 888 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr8397g00002 1199 FunFam Phospholipid-transporting ATPase 642 849 - -
Mupr8397g00002 1199 SUPERFAMILY Calcium ATPase, transduction domain A 121 265 IPR008250 -
Mupr8397g00002 1199 Gene3D - 506 641 IPR023299 GO:0000166
Mupr8397g00002 1199 Pfam Cation transport ATPase (P-type) 478 569 - -
Mupr8397g00002 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Mupr8397g00002 1199 Pfam E1-E2 ATPase 121 311 - -
Mupr8397g00002 1199 SUPERFAMILY HAD-like 366 851 IPR036412 -
Mupr8397g00002 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 837 1087 IPR032630 -
Mupr8397g00002 1199 SFLD C1.7: P-type atpase like 360 860 - -
Mupr8397g00002 1199 FunFam Phospholipid-transporting ATPase 100 269 - -
Mupr8397g00002 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 647 IPR023299 GO:0000166
Mupr8397g00002 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 1135 - -
Mupr8397g00002 1199 FunFam Phospholipid-transporting ATPase 486 641 - -
Mupr8397g00002 1199 FunFam Phospholipid-transporting ATPase IC 375 387 - -
Mupr8397g00002 1199 NCBIfam phospholipid-translocating P-type ATPase 39 1095 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mupr8397g00002 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 1087 IPR023298 -
Mupr8397g00002 1199 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
Mupr8397g00002 1199 SFLD p-type atpase 360 860 IPR044492 -
Mupr8397g00002 1199 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Mupr8397g00002 1199 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Mupr8397g00002 1199 CDD P-type_ATPase_APLT_Dnf-like 41 969 - -
Mupr8397g00002 1199 Gene3D - 104 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8397g00002 Mupr-Chr8397 11014 36777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8397g00002 3 1180 Primary Pumps ATPases AT1G59820 78.833 0.0 2016