Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8389g00002 ATGAAGTGCCTACGGTCAGGGGAGTCGTTGGGAGGAGCAGATGAAGTGTTTCCTTCATCTGGATCTCTTGCAAGTGCAACCAAGGACTTCTCAGCTAGTGGACATTCTTTCCTAGCTGAACAGGCTGATAAGAAGCCAGACACTGGCAACATAGAAGAAGCTGAGTCATCCTTACGCGAGAGTGGCGTCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATATAGTAGCTGCTTTACATGTCTTTGAGGGAATAGATATAGGTGTTGTGACTCCTAAGATCAAAATTGCCCTTTCCAGAAGTAGAGAACACCGCAAGAGACATTCTCAAAATCATGCTGAACCACAAATGTCTATACATGCTGTTGGCTTACTGTTGGAAGCTGTCTTCCTAAAAGCAAAATGTTTACAGGTTCTTGAAAGGTTTAAAGAGGCTGCCCAATCTTGCAAAGTTATTCTGGATATAGTCGAGTCTTCATTGCCTGAAGGCTTGCCTGATGACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAAGGCAGTTGAGCTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGACGAGCACTCCTTCATCAATGGAATCTTGATGCGGAGACTATAGCGAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTTTATAGTGGAGGAGAAGCTACACCCCCTAATCTTCGTTCCCAAATGGATGGCTCATTTGTACCTAGAAACAACATAGAAGAGGCTATACTTCTTTTAATGATTTTGTTAAGAAAAGTCTCTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTGTTTCAGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTACTTCCTGCGACTATCCATCGAAGTGAAAGGTACTATGCTCTAGCTCTTAGTTATTATGGAGCAGGTAAGGACTTGGTAGCACTGGATCTCCTCAGAAAATTGTTGCGTAGTAGAGAGGACCAAAACCATGTTCCTGGTTTGTTAGTGGCTTCTAAGATTTGTTGTGAGAGCTCTAGTCTTGCCGAAGAAGGAGTAAGCTATGCTCAGAGAGTGCTTGAGAGATTGGATGGCAGATGTAATCAGCTAGAAAGTATTGCCAAGTTCTTTCTTGGTGTGTCACTTTCAGCACAATCGAAATTGGCTGTTTCTGATTCTGAGAGGCTTAAGAGACAATCTGAGGCACTTCATACTCTAGAAACTGCTTGCAGAATGACCGAAATGAGAAACCCCCTTGTACTATACCATCTCAGTTTAGAATACGCTGAACAAAGGAAGTTGGATGCTGCACTTTATTATGCAAAGTGCTTTCTGAAATTGGAAGGTGGCTCTAATGTTAAAGGATGGTTATTGTTAGCCCGGATATTGTCTGCTCAAAAACAGTTTTTGGATGCTGAATCTATTATCAATGCAGCTTTGGATCAAACTGGAAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAGTGCCATTGAGACATATACTCAGCTTCTTGCTGTTCTTCAAATTCAGAGTAAAGGTTTTGGTTCTGGGAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCATGATATTGCTTATGTATATATCAGTCTTTCACAGTGGCATGATGCAGAGATGTGTCTTTCAAAATCCAAGACCATCAAACCACTCTCTGCTTCTAGATGTCATGCAATAGGCCTAATGTACGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTTGGTGATGCTTTGGACATTGATCCTGGCCATGTCCCTAGCTTAATCTCCACTGCTATAGTTCTTAAACGATGTTGTAATAAATCAAATCCAGCAGTTAGAAGCTTTCTGATGGATGCTTTACGGCATGACAGATTCAGTGCTTCTGCTTGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGCATCATCATTAGTTGAAGCTGCTGAATGTTTTCAAGCAGCACACTTTCTTGAAGAATCTGAACCTGTTGAACCTTTCAAATGA 2145 0.4135 MKCLRSGESLGGADEVFPSSGSLASATKDFSASGHSFLAEQADKKPDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKIALSRSREHRKRHSQNHAEPQMSIHAVGLLLEAVFLKAKCLQVLERFKEAAQSCKVILDIVESSLPEGLPDDFGAECKLQETLSKAVELLPELWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPATIHRSERYYALALSYYGAGKDLVALDLLRKLLRSREDQNHVPGLLVASKICCESSSLAEEGVSYAQRVLERLDGRCNQLESIAKFFLGVSLSAQSKLAVSDSERLKRQSEALHTLETACRMTEMRNPLVLYHLSLEYAEQRKLDAALYYAKCFLKLEGGSNVKGWLLLARILSAQKQFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETYTQLLAVLQIQSKGFGSGKKLYKDNRDRARNLEVEIWHDIAYVYISLSQWHDAEMCLSKSKTIKPLSASRCHAIGLMYEAKGLYKEALKAFGDALDIDPGHVPSLISTAIVLKRCCNKSNPAVRSFLMDALRHDRFSASAWYNLGLLHKAEGTASSLVEAAECFQAAHFLEESEPVEPFK 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8389g00002 714 SUPERFAMILY TPR-like 513 686 IPR011990 GO:0005515
Mupr8389g00002 714 MobiDBLite consensus disorder prediction 1 22 - -
Mupr8389g00002 714 Pfam Tetratricopeptide repeat 603 634 IPR019734 GO:0005515
Mupr8389g00002 714 Gene3D Tetratricopeptide repeat domain 549 710 IPR011990 GO:0005515
Mupr8389g00002 714 SMART tpr_5 319 352 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 512 545 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 476 509 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 672 708 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 134 167 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 441 474 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 602 635 IPR019734 GO:0005515
Mupr8389g00002 714 SMART tpr_5 568 601 IPR019734 GO:0005515
Mupr8389g00002 714 SUPERFAMILY TPR-like 418 538 IPR011990 GO:0005515
Mupr8389g00002 714 Gene3D Tetratricopeptide repeat domain 105 546 IPR011990 GO:0005515
Mupr8389g00002 714 SUPERFAMILY TPR-like 135 461 IPR011990 GO:0005515
Mupr8389g00002 714 ProSiteProfiles TPR repeat profile. 602 635 IPR019734 GO:0005515
Mupr8389g00002 714 PANTHER PROTEIN NPG1 1 714 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8389g00002 Mupr-Chr8389 20982 27630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8389g00002 1 714 Calmodulin-binding Proteins AT4G28600 59.229 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8389g00002 K21843 - gmx:100800762 1252.65