Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8386g00007 ATGAATAGGGCTATGCATGGCAACAACAGCACAAGAAGGGGCTTAGCAAAATACACTGGTCCATGCCAGGCGACAAACCCCATTGACAAATGTTGGAGATGTGATCCAAATTGGGAGAAAAACCGCAAGAGACTAGCGGATTGTGCTATTGGGTTTGGGCACGGCACAACGGGGGGTAAAAATGGGAAAATTTACGTGGTAAAGGACTCTTCCGACAAAGACCTCGTGAACCCAAAACCAGGGACATTGAGACATGCGGTGATTCAGAAAGAACCATTGTGGATCATTTTCGCGCGAAGCATGAGCATTAAGCTGATGGGGGAGCTTTTGGTGGCGAGTGACAAGACCATAGATGCGCGTGGTGCCAATGTTCACATTAGCGACGGTGCCCAAATAACGTTGCAATTTGTGAAAAACATAATCATTCACGGCCTGCACGTTCACGACATTAAGAAGTGTAATGGTGGCCTTATAAGAGATTCGGTGAATCACTACGGAGTCCGCACCGTGAGTGACGGCGATGGGATTTCGTTGTTCGGAGCCACCAATGTTTGGATTGATCATGTTTCCATGACCAATTGCGAGGATGGCCTCATTGATGTCATCAGCGCATCAACGGCAGTTACCATCTCCAATTGTCATTTCACCAAACACAACGACGTAATCATTTCTGATTCTACTCCATCTCTATTGTTCAATTATGGCAAAGGTAGTGTGGCAGTAGTAACATTGGTTTTGTTATTCGGTGCCGATGATAACTTCTCAGCCGATAAAGTGATGCAAGTGACTGTGGCTTTCAACCATTTCGGGAAAGGATTGATTCAAAGGATGCCAAGGTGCAGATGGGGCTTCTTTCATATTGTTAACAATGACTACACTCATTGGCTAATGTACGCCATAGGTGGTAGCCAACACCCCACCATCATCAGCCAAGGCAACCGTTTTGTCGCTCCAGACAAACCAAATGCAAAAGAAGTATGTAATTTTGTTATTCATTCATGCACCAAAATTTCAAAACTGTTTTCTACACGTGTGACAAAAAGGGACTATGCACCTGAAAGTGTGTGGAAGTCATGGAATTGGAGATCAGAGGGTGATTTAATGGTGAACGGAGCCTTCTTTATTCAGTCTGGGAAAACCGTTTCAAAACTTCCCAAGACAGACATCAAAGCAAGGCCTGCGAAAGCCGTGGCCAGTCTCACTCGCTTTGCAGGTCCTCTAAAATGTATAGTAAACAAGCCTTGCTGA 1248 0.4519 MNRAMHGNNSTRRGLAKYTGPCQATNPIDKCWRCDPNWEKNRKRLADCAIGFGHGTTGGKNGKIYVVKDSSDKDLVNPKPGTLRHAVIQKEPLWIIFARSMSIKLMGELLVASDKTIDARGANVHISDGAQITLQFVKNIIIHGLHVHDIKKCNGGLIRDSVNHYGVRTVSDGDGISLFGATNVWIDHVSMTNCEDGLIDVISASTAVTISNCHFTKHNDVIISDSTPSLLFNYGKGSVAVVTLVLLFGADDNFSADKVMQVTVAFNHFGKGLIQRMPRCRWGFFHIVNNDYTHWLMYAIGGSQHPTIISQGNRFVAPDKPNAKEVCNFVIHSCTKISKLFSTRVTKRDYAPESVWKSWNWRSEGDLMVNGAFFIQSGKTVSKLPKTDIKARPAKAVASLTRFAGPLKCIVNKPC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8386g00007 415 PANTHER PECTATE LYASE 18-RELATED 8 413 IPR045032 GO:0030570
Mupr8386g00007 415 PRINTS Pollen allergen Amb family signature 108 124 IPR018082 -
Mupr8386g00007 415 PRINTS Pollen allergen Amb family signature 172 193 IPR018082 -
Mupr8386g00007 415 PRINTS Pollen allergen Amb family signature 72 97 IPR018082 -
Mupr8386g00007 415 PRINTS Pollen allergen Amb family signature 48 65 IPR018082 -
Mupr8386g00007 415 SUPERFAMILY Pectin lyase-like 26 406 IPR011050 -
Mupr8386g00007 415 Gene3D - 25 408 IPR012334 -
Mupr8386g00007 415 Pfam Pectate lyase 245 315 IPR002022 -
Mupr8386g00007 415 SMART amb_all 100 321 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8386g00007 Mupr-Chr8386 99806 101159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8386g00007 9 415 Polysaccharide Lyase AT3G01270 57.109 3.60e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8386g00007 K01728 - gmx:100801864 627.476