Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8386g00001 ATGATTCAAAACGAGTACGCGTCGGTTCATGGCTTCATCATCATGATCAAACCAACACAACCATACAATACACCCCATCATCACGCTTTCTCTCCCACACAACACGACATCTACAGAACCATCATTTTTTGCGTCAAACGAACATTTGGGGCAAGACTTGAGCTATGGTATCGTAAGCCGTCTTCTTCAGCGAGACACAATCCAGAAATTGATGAAGGTATTCATAATGTTAGACTCTACTCCTACAAAGAACTAAGAAAAGCCACTGAAGATTTTAGTCCAGCCAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACGGCTTAAAGATGGAAAAGTTGCTGCAATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCAGAGATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGTTGTGCGGAAAAAAATAACAGAATATTAGTCTACAATTACCTCGAGAATAACAGCCTATCACAAACTCTTCTAGGTGGAAGCCACAGTAGAATCTACTTTGATTGGAGAACACGATGTAAAATATGTGTTGGAGTTGCACGTGGGCTTGCCTTCCTTCATGAAGATGTGAGGCCTCATATTGTTCATAGGGATATAAAAGCAAGCAATATCCTGCTTGACAAAGATCTTACGCCCAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCAAACATGACTCATGTCAGCACACGCGTAGCAGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAGGGGGGAAGCTAACACGGAAAGCAGACATTTACAGCTTTGGTGTCCTTCTCGTGGAGATAGTCAGTGGAAGATGTAACACAAATTCACGACTACCAATAGAAGAACAATTTCTTCTAGAGAGGACATGGGAACTTTATGAGCGAAAGGAATTGGTTGGACTGGTAGATGCATCACTAAACGGGGAATTTGATGCCGAGCAGGCTTGTGAGCTTCTGAAGATTGGCCTTCTTTGCACTCAGGAATCGCCGAAGCTCCGGCCATCCATGTCTTCAGTGGTCAAGATGCTCACTGGAAAAATGGACGTTGATGACAGTAAGATATCAAAGCCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGGAGGAATGAAGAAAGTAGTAGTATTGATATGAAGACATCTACATACAACACATCCTCTTCCTCATACAACCATGATACTACCATGTCATCCACTACAACCTTCACTGCAAAATATGATCAAAGCATATAA 1296 0.4128 MIQNEYASVHGFIIMIKPTQPYNTPHHHAFSPTQHDIYRTIIFCVKRTFGARLELWYRKPSSSARHNPEIDEGIHNVRLYSYKELRKATEDFSPANKIGEGGFGSVYKGRLKDGKVAAIKVLSAESRQGVKEFLTEINVISEIEHENLVKLYGCCAEKNNRILVYNYLENNSLSQTLLGGSHSRIYFDWRTRCKICVGVARGLAFLHEDVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADIYSFGVLLVEIVSGRCNTNSRLPIEEQFLLERTWELYERKELVGLVDASLNGEFDAEQACELLKIGLLCTQESPKLRPSMSSVVKMLTGKMDVDDSKISKPALISDFMDLKVRRNEESSSIDMKTSTYNTSSSSYNHDTTMSSTTTFTAKYDQSI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8386g00001 431 Gene3D Phosphorylase Kinase; domain 1 62 167 - -
Mupr8386g00001 431 Pfam Protein kinase domain 95 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8386g00001 431 Gene3D Transferase(Phosphotransferase) domain 1 168 378 - -
Mupr8386g00001 431 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524
Mupr8386g00001 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mupr8386g00001 431 SMART serkin_6 92 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8386g00001 431 CDD STKc_IRAK 98 365 - -
Mupr8386g00001 431 SUPERFAMILY Protein kinase-like (PK-like) 69 364 IPR011009 -
Mupr8386g00001 431 ProSiteProfiles Protein kinase domain profile. 92 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8386g00001 431 FunFam cold-responsive protein kinase 1 63 167 - -
Mupr8386g00001 431 FunFam cold-responsive protein kinase 1 168 379 - -
Mupr8386g00001 431 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 58 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8386g00001 Mupr-Chr8386 980 5293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8386g00001 65 410 Receptor kinase-like Gene Family AT1G07650 51.124 1.15e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr8386g00001 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8386g00001 - - gmx:100782320 656.751