Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8339g00001 ATGGCCCAAGCCATTACCAAACCTATAAATACACGTTTCCTTTCATTCTATTCAATTCATATTCATTCATCACTTTTTTGTTCCTTCACACAACTCACAATCAACCCTATCCTATCCATGGCATCAGGCGGAACCGAAGCTTTTCCAGACTTGGGAAAACACTGCCAGCACAATCATTGCAACCAGCTTGATTTCCTTCCTTTCACCTGCCATGGTTGCCAACAGGTGTTTTGTTTGGAACACAGATCGTACAAGTCTCACGCGTGCCCGAAATCCGACCACAACAGCAGGAAGGTGGTTGTTTGCGAAGCATGTTCTGTGTCCATTGAGACCACCGGTTACGTGGGACAAGACGAGGAGGCAATCTTGGAGCGCCACCTCAACTCTGGTAACTGCGACCCCACCAAGAAGAAGAAACCCATTTGCCCTGTCAAGCGCTGCAAGGAGGTTTTGACGTTTTCCAACACCAGCACGTGTAAAACTTGCCACATGAAGGTGTGCCTCAAGCACCGTTTCCCTGCTGATCATGCTTGTAGCAGAGGAGCTTCAGCTTCTTCTGTTTCAAATGGTCGGTGGAACAATCGCTTTTTGGCTGCTATGGCTTCAAGGATTGGACAAGACTGTGCCAAAACTGGTGCAACTCGTCCTACTTCTCCTCCTAGCACTCCTTCTGTTAAGGCCTGTTGA 687 0.4803 MAQAITKPINTRFLSFYSIHIHSSLFCSFTQLTINPILSMASGGTEAFPDLGKHCQHNHCNQLDFLPFTCHGCQQVFCLEHRSYKSHACPKSDHNSRKVVVCEACSVSIETTGYVGQDEEAILERHLNSGNCDPTKKKKPICPVKRCKEVLTFSNTSTCKTCHMKVCLKHRFPADHACSRGASASSVSNGRWNNRFLAAMASRIGQDCAKTGATRPTSPPSTPSVKAC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8339g00001 228 SUPERFAMILY AN1-like Zinc finger 47 100 IPR035896 -
Mupr8339g00001 228 ProSiteProfiles Zinc finger AN1-type profile. 136 186 IPR000058 GO:0008270
Mupr8339g00001 228 ProSiteProfiles Zinc finger AN1-type profile. 49 97 IPR000058 GO:0008270
Mupr8339g00001 228 MobiDBLite consensus disorder prediction 211 228 - -
Mupr8339g00001 228 Pfam AN1-like Zinc finger 142 180 IPR000058 GO:0008270
Mupr8339g00001 228 Pfam AN1-like Zinc finger 55 92 IPR000058 GO:0008270
Mupr8339g00001 228 SUPERFAMILY AN1-like Zinc finger 134 182 IPR035896 -
Mupr8339g00001 228 Gene3D - 40 107 IPR035896 -
Mupr8339g00001 228 MobiDBLite consensus disorder prediction 209 228 - -
Mupr8339g00001 228 Gene3D - 119 194 IPR035896 -
Mupr8339g00001 228 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 47 213 - -
Mupr8339g00001 228 SMART AN1_Zf_4 55 94 IPR000058 GO:0008270
Mupr8339g00001 228 SMART AN1_Zf_4 142 183 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8339g00001 Mupr-Chr8339 2996 4187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8339g00001 40 208 C2H2 Transcription Factor Family AT3G28210 61.538 2.44e-77 229