Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8335g00011 ATGTCAGAAACTAGTCCTTTTTCCATTGATATTGCAAAAATGAGAAATGCTCTTCTACCATCAGTTTCTTCAAGGCATCACTGCTATGGAAACGATGAAGTTCAGTTAGAAATTTTAGAGGGCTCCATGCAGATGAACGACCTAACTTTATGTGTTTGTAATTCACTTTTTAATGGTCACTTCCATAGCAATGGCTTCAACTTGGAGTCTAGAATATTCAACAATGACAGCCAATTGGGCAAAGGAGTCTATACACAGCTAGCTAGCCAGTCTCTGATTTGTGACTACAATCATCACCCAGGTAGTCTCTATGCTATCCCAAGCAGCAAAGACATTTCTCAGCAATCATTGTTACTTGACAAGGACCCTTCTCTTTCTCAATATGAAGGAGTATGTGGAAATGCCAGAAAACGTCCTTTTGAGTACACTGACATGTCCTTGTGGGAAAAATTGAAAAGCAATTCCAAAAGCAAAACCACAATCATGGAACCAAAATGGCATCAAGCAAAAGAAGTTTCAGAGATAATCCCTCGGCACAAATTGCATGCGCCTATGAGGAGAAATCAGAAGCTTAGTGATAAAGTCACAACTCTACGAAAGTTGGTTTCACCTTTTGGAAAGACTGACACCGCCTCAGTTCTTCATGAGGCTTCTTTATATATCAAGCTTCTTCAAGCACAAATCCGGACTTTGTTTCAGCTGCTGAGCTTCTCTTACTTTAGTACGATTAAAAATCCCCATACTCAGGAATGTGGGGACAAATTGCAGGTTGACCTAAGGAGCAGAGGACTTTGTTTGGTTCCCATATCAATCACAGAGAATGTAACAATGGTAGATCAGATTCATCATGGTTCAGCCTCAAAAATTATTCACTCC 876 0.3995 MSETSPFSIDIAKMRNALLPSVSSRHHCYGNDEVQLEILEGSMQMNDLTLCVCNSLFNGHFHSNGFNLESRIFNNDSQLGKGVYTQLASQSLICDYNHHPGSLYAIPSSKDISQQSLLLDKDPSLSQYEGVCGNARKRPFEYTDMSLWEKLKSNSKSKTTIMEPKWHQAKEVSEIIPRHKLHAPMRRNQKLSDKVTTLRKLVSPFGKTDTASVLHEASLYIKLLQAQIRTLFQLLSFSYFSTIKNPHTQECGDKLQVDLRSRGLCLVPISITENVTMVDQIHHGSASKIIHS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8335g00011 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 236 IPR036638 GO:0046983
Mupr8335g00011 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 102 273 - -
Mupr8335g00011 292 CDD bHLH_AtbHLH_like 186 231 IPR045239 -
Mupr8335g00011 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8335g00011 Mupr-Chr8335 76430 79533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8335g00011 171 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21340 42.975 1.05e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8335g00011 - - ccaj:109812405 431.024