Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8334g00003 ATGAGAAAACCTTGTTGTGATAAAGAAAACATCAATAAAGGTGCTTGGTCCAAGCAAGAAGATCAGAAGCTCATTGACTACATCCGAGTTCATGGTGAAGGCTGTTGGCGTTCCATTCCCAAAGCTGCTGGGCTTCATCGTTGTGGTAAAAGCTGTAGACTGAGATGGTTAAACTATTTAAGACCAGACATCAAACGTGGAATCTTTGCTGAAGATGAAGAAGACCTTATCATCAAACTCCATGCCCTCCTTGGTAACAGGTGGTCACTCATTGCTGGAAGGTTGCCCGGAAGGACAGACAATGAGGTGAAGAACTATTGGAATTCTCACATCCGCAGAAAACTAATAAAGATGGGAATTGATCCAAATAACCATAAGCCACACCAAAGCTTTCCTCCTCCTCATGCTTCTGCTGAGGGTGCATCAACATCTGAGTCCATGAACAAAGACCACAAAGTCCTTTTCTTCAAATCCCGTGGTGCTGAAACTGATAGGATTTCCTTCACAAAGAGTCTCGAAGAAGAAACACCAATTATTTCATCACCCCCTTTGAATCTTGACCTAACAATTGCTTTGCCTTCTCCTACAGTGGAAGACAAGCCGTTACAAAATTCTGAGTCCGCAAAGACATGGGACATGGACATAGATCTCAACTGTTAA 660 0.4288 MRKPCCDKENINKGAWSKQEDQKLIDYIRVHGEGCWRSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKPHQSFPPPHASAEGASTSESMNKDHKVLFFKSRGAETDRISFTKSLEEETPIISSPPLNLDLTIALPSPTVEDKPLQNSESAKTWDMDIDLNC 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8334g00003 219 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 149 - -
Mupr8334g00003 219 FunFam MYB-related transcription factor 12 65 - -
Mupr8334g00003 219 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mupr8334g00003 219 CDD SANT 71 111 IPR001005 -
Mupr8334g00003 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mupr8334g00003 219 CDD SANT 15 60 IPR001005 -
Mupr8334g00003 219 FunFam MYB transcription factor 67 128 - -
Mupr8334g00003 219 SMART sant 65 113 IPR001005 -
Mupr8334g00003 219 SMART sant 12 62 IPR001005 -
Mupr8334g00003 219 Gene3D - 68 132 - -
Mupr8334g00003 219 Gene3D - 13 65 - -
Mupr8334g00003 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mupr8334g00003 219 MobiDBLite consensus disorder prediction 122 145 - -
Mupr8334g00003 219 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Mupr8334g00003 219 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mupr8334g00003 219 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mupr8334g00003 219 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8334g00003 Mupr-Chr8334 33604 35162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8334g00003 2 193 MYB Transcription Factor Family AT4G38620 55.340 6.51e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8334g00003 Myb_DNA-binding 1e-15 CL0123