Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8324g00003 ATGGGGCATAGACATTTATATAGCTCAACTCCAATGTTTGAGGGTGAACCTGACCAGAACTGGAATCATATGCATACTGATCAACAATATGTGCACCTTGGTAGGACTACCACTTCAGACAATGGTTCTTTCATTTATCCTTTGGAAAATATGTCCATAGATAGCATTTCTTTTCCATCTCATTGGAACACTGCACCAAGGTCTAACGGATATGCATCCACAAGTCTCAACATTGAAGCACCTCCTCATCCAACAGATGCATCAGGCACTTCTCATGATCATTTTCTGCATTCATCAAGTGCTGGAATGTTTTATGCAGTGTCTGAAAATTATGTACACCAGCCTTCTAGTTCCAATTATGACAGACAAGCATTTCCTGTTGCCGATGGTGGTTTTATTGATCTTACAATGGGAAATGGACGAGGGCCTCACAAGCGGAAAAGCCCTGGAATTCCTTCGGTCTGTGAGAGAGGCAGTACAAGCAGATACTATAATGCTGGAAATGCAGCTGATCGTCCTACATCTTCGGAATTGCGGCCAGAGAAGTCCAATATGGATTCTCTATACATGCCTTGGGATCATGTTAATATGACACCCACATTCAGAGGTAGAGGCCTTCCAATACGGGGTGAGGGTTCTTTAAGGAATGTGAGGAGCCGTTCTGCAGTTGATTTGGAATCCAACTTGGCTAGGACCCATTTATTGAGTACTCATTCACACAATGCATATTCTACTGGTCCACCAATTGAACATTCTAGCACGGTTGATCTTTCAACTCAAACTTCTGGTACTTTGACGAGGGACTGGAGCCAAATGAGTATATGTCCTGCACATGGAAGGGCATCATCATCAGATGCAAATGCTTTTAATCATGAGGCAAGTCATTTTCTTATTGGAAGTGGTTCTAGTAATGCTCCTGTAGATGTTGGAGGTTCTCATAATGAATTTGGTACAAGCAGAAATCCTACTGCTCCTCAAAGTTTTCATAATAACCTGACTCAAACTGCAAGAGGGGTTCGCAGTAACTATTCTCAAAGATCCACTCCAACTTTTAGGGCTTCCTCAAGCTTGCGATTGGGTCGTGTGGCACCTTCTGATGATGGATTGCATATGGTGGCTGAAAGTTACTCTTCTAGACATCCAAGGTCATTGACCACCATTGGCTGGCACAACAGTGATAGAAATGGAAGGTCAAGGATACCTAGTGACAGATATCGATCATTGGCTGATGAGGTTGGTCTCAATGGTCGCTTTAACTCTGAGGGTTTCATGATTGTTGATCGCACTTCACTGTATGGTTCTAGGAATATGCTTGATCAGCATAGAGACCTGAGGATGGACATAGACAACATGAGTTATGAGGAACTACTTGCACTTGGAGAGAGAATTGGCCATGTGAGCACAGGATTGTCTGAAGATTTGATTTCCAAGTATTTGACAGAAACAATATACTGTTCATCCGAGCCAAGTCAAGAAGAAGGAACTTGTGCAATCTGCCTGGAAGAATACAAGAACATGGACGATGTTGGGACGCTGAAAACTTGTGGGCATGATTACCATGTGGGTTGCGTTAGAAAGTGGTTATCTATGAAGAAAGTATGTCCTATCTGCAAAGCTTCTGTTTTGCCCGAGGATACAAAGGATAAATAA 1650 0.4267 MGHRHLYSSTPMFEGEPDQNWNHMHTDQQYVHLGRTTTSDNGSFIYPLENMSIDSISFPSHWNTAPRSNGYASTSLNIEAPPHPTDASGTSHDHFLHSSSAGMFYAVSENYVHQPSSSNYDRQAFPVADGGFIDLTMGNGRGPHKRKSPGIPSVCERGSTSRYYNAGNAADRPTSSELRPEKSNMDSLYMPWDHVNMTPTFRGRGLPIRGEGSLRNVRSRSAVDLESNLARTHLLSTHSHNAYSTGPPIEHSSTVDLSTQTSGTLTRDWSQMSICPAHGRASSSDANAFNHEASHFLIGSGSSNAPVDVGGSHNEFGTSRNPTAPQSFHNNLTQTARGVRSNYSQRSTPTFRASSSLRLGRVAPSDDGLHMVAESYSSRHPRSLTTIGWHNSDRNGRSRIPSDRYRSLADEVGLNGRFNSEGFMIVDRTSLYGSRNMLDQHRDLRMDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEPSQEEGTCAICLEEYKNMDDVGTLKTCGHDYHVGCVRKWLSMKKVCPICKASVLPEDTKDK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8324g00003 549 CDD RING-H2_RNF24-like 494 541 - -
Mupr8324g00003 549 MobiDBLite consensus disorder prediction 239 263 - -
Mupr8324g00003 549 Pfam Ring finger domain 495 538 IPR001841 -
Mupr8324g00003 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 461 543 IPR013083 -
Mupr8324g00003 549 SMART ring_2 496 537 IPR001841 -
Mupr8324g00003 549 MobiDBLite consensus disorder prediction 140 183 - -
Mupr8324g00003 549 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 461 542 - -
Mupr8324g00003 549 SUPERFAMILY RING/U-box 486 543 - -
Mupr8324g00003 549 MobiDBLite consensus disorder prediction 154 172 - -
Mupr8324g00003 549 ProSiteProfiles Zinc finger RING-type profile. 496 538 IPR001841 -
Mupr8324g00003 549 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 141 542 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8324g00003 Mupr-Chr8324 10985 17688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8324g00003 1 548 C3H Transcription Factor Family AT2G37150 41.398 1.06e-112 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8324g00003 - - gmx:100786013 1000.73