Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8319g00002 ATGGAACCCACTTGCAATTGGAACGATGCCATTGTGAAGGGTAATTCTTCTGATCCAGTCATGTCGTTCAGAGGGACCCCACTTGTCGTGGACGAGCTTGATTTCTTTGCTGAGAAGAGAAAAGAGAGTGAAACTGAAGATGATATTGATGATCAAAGTCTTGAGCTTCTTCATGTAGATACTAGCTTAGATCTTCTTACGAAGAATAATACCGGTGGCAGCAGATCAACAGAAGAAGATGCCGCATTGGAAACTATGGATGATAAGAGAAACGAGTTTGTAGCTTTGGTAACTGAGTTGCACCAAATGAATGCTGAAAATCAACGTTTAAGAGAGTTGGTTGATCAGGTGAACAATAACTACAACGCCCTACGCATGCAACTTATCAAGCTAACGCAGAAGCAGCATAACCATGGGAATAACGGAGTGATAGGGGAGAAAGAAGATATTGTTCCAAGGTCATTTTTTGACATGGGTGTTGGTGAGAAGGATGAGGCTTCCCAGCAATCTTCAGAGGGAAAACTGAGAGAAAGCAAAAACATGGTTGAGTTGATAGATCAGTGCAAGGGACACGGCAAAGATGTTGTTTTGGAGGCAGATAATAATAAGTTGGATTCTGGAAGGGAAAGTTCAAAAGCCAGAAACGCTGACCAAGAATTCTCTAACAAAGTTCCTAGGTTGGATCAAGCTTCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCTGTTCGAGCACGATCAGATTCTTCAATGATTGCAGATGGATGCCAATGGCGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCTTGTCCAAGAGCCTATTATCGTTGCACAATGAGTACTGGTTGTCCAGTACGAAAACAAGTACAAAGGTGTGCTGAAGATCGTAGTGTGCTGATAACTACATATGAAGGGCAGCATAACCATCCACTCCCTCCCACAGCTCAGGCAATGGCATCAACCACATCTGCAGCTGCCTCAATGCTTCTTTCTGGATCAATGCCTAGCTCAGATGGCCTAATCAATCCAAGCATATTAGAAAGTGCTTCACTTCCCTGCTCTCAAAACATGGCAACTCTCTCTGCCTCAGCTCCATTTCCCACCATCACACTGGACCTCACTCAGAATGCTACCAATTCCTCACACCTCCAAAGGGAACCACAGGGCCAACTTGGCCTCCTATCTCCACTTTTGGCTCATAAGTTTATGTCAGTGCCAAAAATTTTTGGACAGTCTCTGTGTGACCAAACTAAGCTTGCTGGCTTGCATGAGTCTCAGGGAGTGGACACAGCTTCATCATTTGCTAACACATTAAATGCAGCTACTGCTGCTATCACTGCAGACCCTAATTTCACTGCGGCTCTTGTGGCCGCTATAACATCTGTCATTGGGAATTCTCATTCAAACACCAGTGCCACCAATAACACAAGTGGAGATGAGCAGTGCAATAATAATGCATGA 1467 0.441 MEPTCNWNDAIVKGNSSDPVMSFRGTPLVVDELDFFAEKRKESETEDDIDDQSLELLHVDTSLDLLTKNNTGGSRSTEEDAALETMDDKRNEFVALVTELHQMNAENQRLRELVDQVNNNYNALRMQLIKLTQKQHNHGNNGVIGEKEDIVPRSFFDMGVGEKDEASQQSSEGKLRESKNMVELIDQCKGHGKDVVLEADNNKLDSGRESSKARNADQEFSNKVPRLDQASETMSMIKKARVSVRARSDSSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPSILESASLPCSQNMATLSASAPFPTITLDLTQNATNSSHLQREPQGQLGLLSPLLAHKFMSVPKIFGQSLCDQTKLAGLHESQGVDTASSFANTLNAATAAITADPNFTAALVAAITSVIGNSHSNTSATNNTSGDEQCNNNA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8319g00002 488 Pfam WRKY DNA -binding domain 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8319g00002 488 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8319g00002 488 Coils Coil 100 134 - -
Mupr8319g00002 488 Gene3D WRKY domain 238 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8319g00002 488 FunFam probable WRKY transcription factor 31 238 315 - -
Mupr8319g00002 488 SUPERFAMILY WRKY DNA-binding domain 246 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8319g00002 488 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8319g00002 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 78 476 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8319g00002 Mupr-Chr8319 3342 6157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8319g00002 29 477 WRKY Transcription Factor Family AT1G62300 47.521 6.41e-119 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr8319g00002 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8319g00002 - - vum:124848283 655.981