Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8315g00005 GGAAGAGGGGTTACGATGGATGCTGAAACTGAGACTGAGGAACTTATTAATTTGAACAATAAATCAAGTAGCTGTGGTGGGAATAATAATAAGAGTGGCGATGGCTTCATTGACAGGAGCAAAGTGAGGATTTTGTTGTGTGATAACGATTCCAAGAGTTCTGAAGAGGTTTCTACTCTTCTTTTGAGATGCTCTTACCAGGTTACTTCAGTAAGGTCAGCTAGGCAAGTAATTGATGCACTGAATGCGGAGGGGCAATATATAGACATCATACTAGCTGAAGTTGACCTTCCAATAAAGAAAGGCATGAAGATGTTGAAGTACATAACAAGGGATAAAGAATTGTGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGGTGTCCATTGTTGTAAAGTGCTTGAGGCTTGGAGCAGCCGACTACCTAGTAAAGCCTTTACGCACAAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAATAACATCTTGAATTATGACTTCAATCTGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACTAATCAAGAGACAGGAATATCAATCCAACAAGAACACGAGGCTAGTATTGCTACTGCTTCTGCTGTTGCGGTGGTGCTTTCCGATGCTCTTGTATCAGAATATCAACCTGATGTGCCTGGAATAAGTGATCGTCGAACAGGTACTCCGTGGCAGAATCCATCATGCAGCAGAACTACTGATGGACATTTTTCATTTGGTCCAAAGAAGAGTGAACTGAGGATTGGAGAGTCATCAGCCTTTTTCACTTATGTCAAGGCAACAACACAGAGGAGCAACTTTGAAGAGAGTTCTCATGTAAGAGTGGATGATATGAATCAAGCATGTGCTCAACAGGGGGGTAATGACCTTAAAACACATGAAAATGGAGAAATGTTTGAAAACCATTCGCAAGATGAGTTACCTAGCAGCAATAGTATCCCTGATTCTTCCTCTATTGAGAGATCTTGTACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGCATTACAATAAGGAAGAACATCCTCAGGGAGTGGTGCATCGGTCCGAGCTTGAACCATCTGGCTTGCCTACCCAACATGCTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCATCATCGGCACAACTGTATCAAAAGAATATCCATGACCTGCAGAGTCATGCTGGTTCTTCTATGATTGCACAGTACAATCATCCTCCCCAATGTCCTCCTCATGCAACTGGGATGGCATCCTTCCCATATTATCCAATGAGTATTTGCTTACAACCTGGTCAGATTTCTACAACTCATTCTTGGCCATCATTAGGAAATTCAAGTCCATGCGAAGTAAAATTAAGTAAAGTCGATAGGAGAGAAGCGGCATTGATGAAGTTTAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAACCGAAAACGGCTCGCTGAAAGACGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTGCTTCCACTGATTATGATGAAGATGATGACGAAGAGGAAGACAACCATGTAGCAAGAGATTCCTCTCCTGAGAATGCTTGA 1719 0.4188 GRGVTMDAETETEELINLNNKSSSCGGNNNKSGDGFIDRSKVRILLCDNDSKSSEEVSTLLLRCSYQVTSVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYITRDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFNLVASDPSDANTNSTTLFSDDTDDKSKRSTNQETGISIQQEHEASIATASAVAVVLSDALVSEYQPDVPGISDRRTGTPWQNPSCSRTTDGHFSFGPKKSELRIGESSAFFTYVKATTQRSNFEESSHVRVDDMNQACAQQGGNDLKTHENGEMFENHSQDELPSSNSIPDSSSIERSCTPPASMEVSQQKHYNKEEHPQGVVHRSELEPSGLPTQHAYPYYISGVVNHVMMPSSAQLYQKNIHDLQSHAGSSMIAQYNHPPQCPPHATGMASFPYYPMSICLQPGQISTTHSWPSLGNSSPCEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDDEEEDNHVARDSSPENA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8315g00005 572 PANTHER TWO-COMPONENT RESPONSE REGULATOR 42 249 IPR045279 GO:0009736
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 336 390 - -
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 192 217 - -
Mupr8315g00005 572 Pfam CCT motif 492 534 IPR010402 GO:0005515
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 537 572 - -
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 247 272 - -
Mupr8315g00005 572 SUPERFAMILY CheY-like 40 168 IPR011006 -
Mupr8315g00005 572 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 369 383 - -
Mupr8315g00005 572 ProSiteProfiles CCT domain profile. 492 534 IPR010402 GO:0005515
Mupr8315g00005 572 SMART REC_2 42 157 IPR001789 GO:0000160
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 337 368 - -
Mupr8315g00005 572 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
Mupr8315g00005 572 Gene3D - 42 247 - -
Mupr8315g00005 572 MobiDBLite consensus disorder prediction 254 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8315g00005 Mupr-Chr8315 29841 34140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8315g00005 31 571 Response Regulator Gene Family AT5G61380 49.363 7.14e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mupr8315g00005 Response_reg 5.2e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8315g00005 K12127 - gmx:100786522 928.702