Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8305g00009 ATGTTCTACGGCCCCATCGTCCGTAGGGACCAGGAGGTCACTCACCGCGGCACCTGGAGAGCCGCTCTCTCCGAATTCATCTCCACACTCATTTTCGTCTTCGCCTCCTCCGGCTCCGCCTTCGCCGTCAACAAGCTCTCCGTCGACGCGCCCGCCGGCCTCGTCATCGCCGCTGTCGCCCACGCCTTCGCCTTCTTCGTCGCCGTGGCTATCGGCAGCAACAACTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGCCGCCTTCGTCGGCGGCAACCTCACCGTGCTCCGCTGCGTCCTCTACTGGATTGCCCAGCTCCTCGGCTCCGTCGTCGCTTGCTTACTCCTCATACTCGCCACCCCCGGACAGGGTGTACCGGCTTTTAGACTCTCGGGTGGAATGGGGGTGAGGAATGCGGTGGTATTAGAGATGGTGATGACGTTCGGGTTAGTGTACACGGTGTACGCCACCACCGTTGACCCTAGGAGTCAGAAGGGTAAATCGGGAACGATGGCGCCAATTGTGATTGGATTCATCGTTGGAGCGAATGTTTTGGTGGCTGGGCCTTTTGGTGGGGCGTCTATGAACCCGGCTGCATCGTTTGGGCCCGCAGTGGTGAGCTGGACTTGGAAAAACCATTGGATTTACTGGGTTGGGCCTCTCGTTGGTGGTGGGCTTGCTGGGTTTGTTTATGAGCTGAAGTACTTCTCTCAGGATGCTGATAAAAAATAA 735 0.5905 MFYGPIVRRDQEVTHRGTWRAALSEFISTLIFVFASSGSAFAVNKLSVDAPAGLVIAAVAHAFAFFVAVAIGSNNSGGHVNPAVTFAAFVGGNLTVLRCVLYWIAQLLGSVVACLLLILATPGQGVPAFRLSGGMGVRNAVVLEMVMTFGLVYTVYATTVDPRSQKGKSGTMAPIVIGFIVGANVLVAGPFGGASMNPAASFGPAVVSWTWKNHWIYWVGPLVGGGLAGFVYELKYFSQDADKK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8305g00009 244 FunFam Probable aquaporin TIP1-1 5 244 - -
Mupr8305g00009 244 ProSitePatterns MIP family signature. 79 87 IPR022357 -
Mupr8305g00009 244 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 SUPERFAMILY Aquaporin-like 12 236 IPR023271 -
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 61 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 CDD MIP 20 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr8305g00009 244 Gene3D Glycerol uptake facilitator protein. 5 243 IPR023271 -
Mupr8305g00009 244 PANTHER AQUAPORIN-8 10 235 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8305g00009 Mupr-Chr8305 63271 64393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8305g00009 7 243 Major Intrinsic Protein MIP AT2G36830 65.000 6.98e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8305g00009 K09873 - gmx:100820403 361.688