Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8305g00003 ATGCAAGGAGAACATTTGCGTAAAGGGACTTGGCTTCAAGACGAAGATAAGCAATTGACCAGCTTTGTGCTCCGTCTTGGGGAACGAAGGTGGGATTCCCTTGCCAAACTAGCTGGCCTCAGGAGAAGTGGTAAAAGCTGTAGGTTAAGATGGATGAACTATCTTCGCCCAAATCTCAAGCATGGTCCTTTTAGTGTTGAAGAAGAGCAGCTTATTTTTCAGCTTCAACAGCAATTGGGTAACAAGTGGGCAAAGATTGCTCGGAAACTTCCAGGAAGAACTGACAATGAAATCAAGAATTACTGGAGAACTCATTTAAGAAAAAGAGCTCAAGTTCAACAAGAAGTCTCAAGAGATTTCAAGTATAACATGGAAAGTACAACACAAGATTTCAACCAGAAAAGCATTGATATGGTTTCCAAGGACTACACAGGAATCTTTTGTTATCGAGATAGTGAGTGGGAGACTATGGATAGCTCCATAGACACTTTACCCTTATCAAATTGGGAATTGAGAAGCTCACCTTATGAAAGCAGGATATTGAATTGGATAGCAGAATTGCAAAATGGATATGGTGAGAAAGAACATGATTGTAATAGCACAGGAACCTTCAACTATAATCCTCAAGAATTTGCTGAGGGGTGTGACTCATGGGATTGTTCAGGTTCCTTGTGGGAGATGAACTACGATGATACTTTGTTTTCAAAATGTTAA 714 0.402 MQGEHLRKGTWLQDEDKQLTSFVLRLGERRWDSLAKLAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEEQLIFQLQQQLGNKWAKIARKLPGRTDNEIKNYWRTHLRKRAQVQQEVSRDFKYNMESTTQDFNQKSIDMVSKDYTGIFCYRDSEWETMDSSIDTLPLSNWELRSSPYESRILNWIAELQNGYGEKEHDCNSTGTFNYNPQEFAEGCDSWDCSGSLWEMNYDDTLFSKC 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8305g00003 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Mupr8305g00003 237 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Mupr8305g00003 237 SMART sant 60 108 IPR001005 -
Mupr8305g00003 237 SMART sant 7 57 IPR001005 -
Mupr8305g00003 237 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mupr8305g00003 237 FunFam Myb transcription factor 8 60 - -
Mupr8305g00003 237 Gene3D - 62 137 - -
Mupr8305g00003 237 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mupr8305g00003 237 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Mupr8305g00003 237 CDD SANT 10 55 IPR001005 -
Mupr8305g00003 237 CDD SANT 81 106 IPR001005 -
Mupr8305g00003 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mupr8305g00003 237 Gene3D - 1 61 - -
Mupr8305g00003 237 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Mupr8305g00003 237 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8305g00003 Mupr-Chr8305 12143 13651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8305g00003 4 111 MYB Transcription Factor Family AT5G59780 62.037 2.86e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8305g00003 Myb_DNA-binding 5.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8305g00003 K09422 - gmx:100783472 371.703