Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8302g00003 ATGAAAGAATACACAACCCTGTTCCTCCTCCTCATCTTACCGTTAATCCCTATAGCCGTCGCGCAAGCCCAAGCCCAGCCCAATGACTATTCCGACCCAAATCTCAACCAGTTCAACCCTTCCTTAGCAATAATCATCATCATATTAGTCGCTGCGCTGTTCCTCATGGGCTTCTTCTCCATCTACGTACGCCAATGCGCGGATACACCCTCAAACGGCGTTGGGGCCGTCACGGCCGCACGCTCCAGGAGGGCCGCGCGTGGGCTTGACCCGGAGGTGATCCAGACCTTCCCCATCCTCGAGTACTCCGAGGTTAAGATCCACAAGATTGGAAAAGAGGCGCTGGAATGCGCTGTTTGCTTGTGCGAGTTTGAGGACACCGAAACGCTGCGTTTGATCCCCAAGTGCGACCACGTTTTCCACCCCGAGTGCATCGACGAGTGGCTGGCCTCGCACACCACGTGCCCCGTTTGCCGAGCCAACCTCGTACCCACCGAGGCCGAGGGTGCTGTTCCTGTTCCTCTTCCTGTTCCCGTTCCCGAATCGCGAGATATCGAAGCGCAAAACGACGCCGTGGAAGCCGCGCCAGAACAGCAAAACGCGGACCGTGTCTTGCCCTTAACCGAGCCCGAGGTTGTTTCAGTTGACAAAACGCTGAACCGGAACCGCACGCGAGGCTCGCGGTCGAACCGGCCGCGCCGGTTTCCTCGGTCGCACTCGACCGGGCATTCCGTGGTCCAACCGGGAGAAAACACGGACCGGTTCACTTTGAGGTTGCCGTTGGAAGTTAGGAAGCAATTAATTAACCGGCAATTGCAACGTGCGAGTAGCTTGATCGTGTTGCCTAGGGAAGGTAGCTCGAGGCGTGGTTACCGGACAGGTGAAGGGAGTAGCAGAGGGAAGGCTTCGAGGCGGCTCGACCGGAGCTTGAAATCGGACCGGTGGATTTTCACGGTGGCTGCACCCTTTTTTGCGAGGGCGTTGTCAATTAGGTCGCCTAGGGTGCGGAACAACGACGTTGAAGGGATGTCGTCGTCTTCTTCCGCGCCTATCATGCCGCCGTCGGCCGTTGATTCGGCTCGACCTCCGGTGTAA 1095 0.5781 MKEYTTLFLLLILPLIPIAVAQAQAQPNDYSDPNLNQFNPSLAIIIIILVAALFLMGFFSIYVRQCADTPSNGVGAVTAARSRRAARGLDPEVIQTFPILEYSEVKIHKIGKEALECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPTEAEGAVPVPLPVPVPESRDIEAQNDAVEAAPEQQNADRVLPLTEPEVVSVDKTLNRNRTRGSRSNRPRRFPRSHSTGHSVVQPGENTDRFTLRLPLEVRKQLINRQLQRASSLIVLPREGSSRRGYRTGEGSSRGKASRRLDRSLKSDRWIFTVAAPFFARALSIRSPRVRNNDVEGMSSSSSAPIMPPSAVDSARPPV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8302g00003 364 CDD RING-H2_EL5-like 116 159 - -
Mupr8302g00003 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 165 IPR013083 -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 337 364 - -
Mupr8302g00003 364 PANTHER RING FINGER DOMAIN-CONTAINING 24 162 - -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 338 353 - -
Mupr8302g00003 364 Pfam Ring finger domain 116 159 IPR001841 -
Mupr8302g00003 364 SMART ring_2 117 158 IPR001841 -
Mupr8302g00003 364 FunFam E3 ubiquitin-protein ligase ATL6 77 165 - -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 284 305 - -
Mupr8302g00003 364 SUPERFAMILY RING/U-box 116 165 - -
Mupr8302g00003 364 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 224 238 - -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 188 251 - -
Mupr8302g00003 364 MobiDBLite consensus disorder prediction 288 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8302g00003 Mupr-Chr8302 52546 53640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8302g00003 9 361 Rapid Response to Elicitors AT3G05200 45.304 5.41e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8302g00003 K10664 - gmx:100781706 533.102