Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8302g00002 ATGTGTTTGGGTGAGGGAGAGAGAGGCATGGCACTAGAAGCAGTAGTGTATCCCCAACCACAAGATCCCTTTTTCTATGGAATGAAAGACCCCTACAACTACACCAACTTGTTAGAAGGTGCTGGACTCAAGTGGGGCTACGAAGAGGAAGAAGACCAAGCTTGTGTCACTTTTCTTGAGAGCCAAACAGAGAATTACCCTTACGGAGATTGGAACTCTTCTTCACCATCGATGTTGCCCCACGTGAATGGTCTATCTTCAGAGACTAGCAACACGCACAAGAGTTCCACCCCTGTTCGCCCCAAAAGGCGCAGAACCAAAAGTAGAAAGAATAAGGAAGAGATTGAGAACCAGAGAATGACTCACATTGCTGTAGAGCGCAACAGAAGGAAACAAATGAACGAGTATCTCTCTATTCTTCGCTCTCTAATGCCTGACTCTTACGTCCAAAGGGGTGATCAAGCATCTATTATTGGGGGTGCTATCAACTTTGTGAAGGAGCTTGAGCAGAGGCTGCAATTTCTTGGTGCTCAGAAAGAGAAAGAGGGGAAATCTGATGTGCCCTTTTCTGAGTTCTTCTCCTTTCCACAGTACTCAACAAGTGGCAGTGGTGCCTGTGATAACTCTGCAGCCATGAGTGAGCAAAAGGGCGAGGTTCAGTCTGGCATTGCTGACATAGAAGTGACAATGGTAGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAACGGCCAAAGCAACTCTTGAAAATAGTCTCTAGTCTGCATGGCATGCGTCTCACAATCTTGCACCTAAATGTTACCACCGCTGGGGAAATTGTCCTCTATTCTCTTAGTGTCAAGGTGGAAGAAGATTGCAAGCTGGGATCAGTGGATGAGATAGCTGCAGCTGCATACCAGATGCTGGATAGGATTCAACAAGAGTCAATGTTGAATTAA 939 0.4579 MCLGEGERGMALEAVVYPQPQDPFFYGMKDPYNYTNLLEGAGLKWGYEEEEDQACVTFLESQTENYPYGDWNSSSPSMLPHVNGLSSETSNTHKSSTPVRPKRRRTKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSILRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQFLGAQKEKEGKSDVPFSEFFSFPQYSTSGSGACDNSAAMSEQKGEVQSGIADIEVTMVESHANLKIRSKKRPKQLLKIVSSLHGMRLTILHLNVTTAGEIVLYSLSVKVEEDCKLGSVDEIAAAAYQMLDRIQQESMLN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8302g00002 312 CDD bHLH_AtFAMA_like 120 191 - -
Mupr8302g00002 312 Gene3D - 86 183 IPR036638 GO:0046983
Mupr8302g00002 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 168 IPR011598 GO:0046983
Mupr8302g00002 312 MobiDBLite consensus disorder prediction 77 96 - -
Mupr8302g00002 312 SMART finulus 123 174 IPR011598 GO:0046983
Mupr8302g00002 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 181 IPR036638 GO:0046983
Mupr8302g00002 312 Coils Coil 165 185 - -
Mupr8302g00002 312 PANTHER MAX DIMERIZATION, MAD 73 308 - -
Mupr8302g00002 312 Pfam Helix-loop-helix DNA-binding domain 118 169 IPR011598 GO:0046983
Mupr8302g00002 312 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8302g00002 Mupr-Chr8302 20056 21632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8302g00002 10 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.436 2.90e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8302g00002 HLH 2.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8302g00002 - - gmx:100782243 526.939