Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8296g00002 ATGGCCACAACCACAACCATGCTTCCACTGCAGTTCAGAACCCACCCTCATCAACCACCATCGCTATTGCTAAGCAGCTCCAACGCTTGTTCCTCTTCTCGCCTGTTATACAACTACAGAAACAAGGTGTACCTTCTTCGCTCCAGCCTTAGAACCCTCAACCGTAGGGTTTTCGCAGTGTCTGGTAATTCCGCATTCAAGATGAACCTTAACGAGTACCTCGTCACACTCGAGAAGCCCCTTGGCATCCGATTCGCTCTTACTTCTGACGGCAAAATCATCGTCCACTCTCTCACCAAAGGGGGTAATGCGGAGAAGTCCAGGATAATTATGGTGGGCGACACTTTGAAGAAAGCTGGCGATTCGTCTCAGAACACTCTCGTCGAGATTAAAGACGTTGGAGATACACAGAAGGTGCTAAATGAGCAAACAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCCACGTCCCCTTTTCCCATTCAACTACTGCACAAGATGAATGATCTTGAAATGGTGTTTAATAGAGGGCGAGTTCCTATTGTCACATGGAACAAGACCCTATTGGCATCAAATTTACAGCCATCTAGTGAGAGCTGTGGGAATTCTGGATTTTTGATGTTCAACTCAAAGTTTCTTAAACCAAATGGAAGCAAGTTATTGGGCAATCAAAATCAACATACCATCACCCATGGTGAGAGAAACTTCATTAGTGAGCAGACAACACAACTTGCTTGTGTTTTTACTGAAGAAGTGTGTGGAGATGGAGATTGGGCTCATGGAAGTTTTCCACTTGAGGAATATATTCAGGCTCTGGATCGTTCCAAGGATGAGATGTACTATAATCACTCTCTTGGTATGCACTATAGTAAGATTACAGAGCAAATATATGTGGGATCCTGTATACAAACAGAAGATGATGTAGAAACCTTGTCAAAAGTTGAGGGAGTTACTGCTGTTCTAAACTTCCAAGGTGGAACTGAAGCTGAAAATTGGGGAATCAATGCAAAATCAATCAATGAATCTTGTCAAAAGAATAATATTCTCATGATCAACTATCCTATACGGGAGGGAGATTCTTATGATATGAGGAAAAAACTCCCATTTTGTGTGGGGCTTTTATTACGGTTGTTAAGGAAGAATCTTCGTGTTTTTGTTACATGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGATGTTTCCCTTCATGCTGCATATACTTGGGTCACTGGGATGCACACGTGCAGGCCAGACAGGCCGGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAACGGAAAACACGATGGGCCTCCCACGCATGCTGTCACGTTTGTGTGGAATGGTCATGAGGGAGAGGATGTAACTTTGGTAGGAGACTTTACTGGAAATTGGAAAGAACCACTCAAGGCAAAGCACCAGGGTGGATCAACACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTATTACTACAAGTTCATTGTTAATGGACAATGGAAGCATTCAACTTCTTCACCAGCAGAAAGGGATGACAGGGGAAATGTTAACAATATAATTGTGATCGGTGAAACTGCCAGCGTTCGGCCTTCTGTTCAGCACCAGCAGAAAGATGCTAACGTTGTCAAGGTGATTGAAAGGCCTTTGAATGAAAAAGAGCGGTTTATGCTGGCAAAAGCAGCTCGTTGTATTGCTTTCTCTATCTGTCCTATCAGATTGGCTTCCAAATAG 1764 0.4337 MATTTTMLPLQFRTHPHQPPSLLLSSSNACSSSRLLYNYRNKVYLLRSSLRTLNRRVFAVSGNSAFKMNLNEYLVTLEKPLGIRFALTSDGKIIVHSLTKGGNAEKSRIIMVGDTLKKAGDSSQNTLVEIKDVGDTQKVLNEQTSSFSLVLERPTSPFPIQLLHKMNDLEMVFNRGRVPIVTWNKTLLASNLQPSSESCGNSGFLMFNSKFLKPNGSKLLGNQNQHTITHGERNFISEQTTQLACVFTEEVCGDGDWAHGSFPLEEYIQALDRSKDEMYYNHSLGMHYSKITEQIYVGSCIQTEDDVETLSKVEGVTAVLNFQGGTEAENWGINAKSINESCQKNNILMINYPIREGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVENGKHDGPPTHAVTFVWNGHEGEDVTLVGDFTGNWKEPLKAKHQGGSTHEVEVKLPQGKYYYKFIVNGQWKHSTSSPAERDDRGNVNNIIVIGETASVRPSVQHQQKDANVVKVIERPLNEKERFMLAKAARCIAFSICPIRLASK 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8296g00002 587 CDD E_set_AMPKbeta_like_N 454 533 - -
Mupr8296g00002 587 SUPERFAMILY E set domains 451 534 IPR014756 -
Mupr8296g00002 587 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 13 585 - -
Mupr8296g00002 587 ProSiteProfiles Dual specificity protein phosphatase domain profile. 287 443 IPR020422 GO:0006470|GO:0008138
Mupr8296g00002 587 Gene3D Protein tyrosine phosphatase superfamily 280 547 IPR029021 -
Mupr8296g00002 587 FunFam Phosphoglucan phosphatase LSF1 chloroplastic 280 446 - -
Mupr8296g00002 587 Gene3D Immunoglobulins 441 537 IPR013783 -
Mupr8296g00002 587 CDD DSP_laforin-like 286 432 IPR045204 GO:0019203
Mupr8296g00002 587 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 277 420 IPR029021 -
Mupr8296g00002 587 FunFam Phosphoglucan phosphatase LSF1, chloroplastic 441 537 - -
Mupr8296g00002 587 Pfam Glycogen recognition site of AMP-activated protein kinase 454 535 IPR032640 -
Mupr8296g00002 587 SUPERFAMILY PDZ domain-like 76 168 IPR036034 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8296g00002 139 587 Protein tyrosine phosphatase (PTP) family AT3G01510 69.265 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8296g00002 - - gmx:100814503 1091.26