Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8255g00001 GCATTGAAGTCATTTAACAATGAAGGAAGCGCTATAAAAAGCAGAGGGATTCGTTCTAACAAGTTTAGTCGCAGAAGACACTTACAAAGACATAGAGAGTGCGTTGACAAAACACAGAACAGAGAAGAAAAGCTCGCCGGAAAATCTAGCTCCGGCGACGGTGGTTGCGTTGGCCCTTGGTTCCAAAAAGGAGCAACGACGGTGGTGGGGAGATCGATGTTGAGCATGGAGGAAGCCTCAAAGAGGCGACCTTTCTTCACCTCACCGGATGAACTGTATGATGAAGAGTATTATGAGAAGCAGTTGCCGGAGAAGAAGCACCGCCTCAGTTCCGAACAGGTCCATCTGTTGGAGAAGAGCTTTGAGGAAGAGAACAAACTGGAGCCGGATAGGAAGGCCCAGTTGGCTAAGAAGCTGGGATTGCAGCCCAGACAGGTGGCTGTGTGGTTTCAGAACCGCAGGGCTCGATGGAAGACCAAGCAACTTGAAAGGGATTATGATGTTCTCAAGTCTTCCTATGATACCCTACTTTCATCCTACGATTCAGTTATGAAGGAGAATGAGAAACTCAAATCTGAGGTGGCATCCTTAAATGAGAAGCTTCAAGTTCAAGCTAAAGAGGTGCCTGAGGAACCATTATATGACAAGAAAGTTGATCCACTTCCAGTAGATGATGATATGGCTCCAATTTTCAGCACAAGGGTGGAGGACCACCTGAGTAGTGGGAGTGTTGGAAGTGCAGTGGTGGACGAGGGAAGTCCACAGCTGGTCCTTGACAGTGTTGATTCATACTTTCCAGCTGACAACTATGGTGGATGTGTGGGCCCGGTTGAAAGGGTTCAGTCAGAGGAGGAGGAGGGGAGTGATGATGGAAGGAGTTACATGATGGATGTGTTTGTGGTATCTGAAACTGAGCACCAAAGCCATGAGGGTTGGTGGAGTAATATGTATTATGTTGGATAA 963 0.4746 ALKSFNNEGSAIKSRGIRSNKFSRRRHLQRHRECVDKTQNREEKLAGKSSSGDGGCVGPWFQKGATTVVGRSMLSMEEASKRRPFFTSPDELYDEEYYEKQLPEKKHRLSSEQVHLLEKSFEEENKLEPDRKAQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDTLLSSYDSVMKENEKLKSEVASLNEKLQVQAKEVPEEPLYDKKVDPLPVDDDMAPIFSTRVEDHLSSGSVGSAVVDEGSPQLVLDSVDSYFPADNYGGCVGPVERVQSEEEEGSDDGRSYMMDVFVVSETEHQSHEGWWSNMYYVG 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8255g00001 320 Pfam Homeobox associated leucine zipper 160 202 IPR003106 GO:0006355|GO:0043565
Mupr8255g00001 320 Gene3D - 103 166 - -
Mupr8255g00001 320 MobiDBLite consensus disorder prediction 1 17 - -
Mupr8255g00001 320 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 91 251 IPR045224 GO:0003700
Mupr8255g00001 320 MobiDBLite consensus disorder prediction 1 61 - -
Mupr8255g00001 320 FunFam Homeobox-leucine zipper protein HAT5 98 162 - -
Mupr8255g00001 320 SMART HOX_1 103 164 IPR001356 GO:0003677
Mupr8255g00001 320 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Mupr8255g00001 320 Pfam Homeodomain 105 158 IPR001356 GO:0003677
Mupr8255g00001 320 SUPERFAMILY Homeodomain-like 94 162 IPR009057 -
Mupr8255g00001 320 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Mupr8255g00001 320 Coils Coil 180 207 - -
Mupr8255g00001 320 PRINTS Lambda-repressor HTH signature 131 140 IPR000047 GO:0003677
Mupr8255g00001 320 PRINTS Lambda-repressor HTH signature 140 156 IPR000047 GO:0003677
Mupr8255g00001 320 MobiDBLite consensus disorder prediction 32 48 - -
Mupr8255g00001 320 CDD homeodomain 105 161 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8255g00001 Mupr-Chr8255 20729 23743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8255g00001 55 311 Homeobox Transcription Factor Family AT3G01470 55.556 1.79e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr8255g00001 Homeodomain 8.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8255g00001 K09338 - gmx:100813420 449.899