Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8235g00001 ATGCCGGACTTCCACGACTCTCTTGCGCCGCCGTCGCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCATCCTCCACCCTCGTCGACGCCTGGGGCCGCCGCTACCTTGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTGGCCGACACCGTCAACGCCCTCCACGGCCTCACCAAGAAGACGCACCGCACCGACGTGCAGTGCAAGAACCGCATCGACACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCTTCCAACGGTGCTGTCTCTTCCTCTTGGCCTTTCTACGAACGATTGGATGCTCTCATCGGCCCTAATTTCAGCGCCAAGAAATCCTCTTCCTCGCCGTCGCCGTCGCCGCCCGTCGCGCTTCCGTTGCTGCCGCATCGCAAAAACCTTTCCTCCCCTGCGATTGCGGTGACGCCGACGGCCGTGGCGCTTCCGCAGAAGCGCCCCTTGCCGCCGGCCATGGACGAGGGTTACTTCAGGAGGAATTATTCCGCCGTGGCTGCTGCTGCTGCTGCGGCGGAGGCTGATGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGCGGAAGAGGTGGAGGAGGATGAGGAGGAGGAAGATGAAGGGAGAGGGAGCGAAGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAAGAGGTTGGCGAAGGCGATAGAGAGGTTTGGTGAAGTTTATGAGAGAGTGGAGGGGCAGAAACTGAGGCAGATGGTTGATTTGGAGAAGCAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGCGAAACGATCTGGCTCTAGCGCTAGCCAAGTGGGCGATGGTTCGATGATGGTGCTTGAAAGGCTGTCTTTGCTTTGGTCTAATCATGGGAAACAACTGTACTAG 969 0.5872 MPDFHDSLAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGLTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGAVSSSWPFYERLDALIGPNFSAKKSSSSPSPSPPVALPLLPHRKNLSSPAIAVTPTAVALPQKRPLPPAMDEGYFRRNYSAVAAAAAAAEADEEEEEEEEEEAEEVEEDEEEEDEGRGSEVEEGEKEREGMKRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRAKRSGSSASQVGDGSMMVLERLSLLWSNHGKQLY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8235g00001 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 290 IPR044823 -
Mupr8235g00001 322 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Mupr8235g00001 322 MobiDBLite consensus disorder prediction 1 20 - -
Mupr8235g00001 322 FunFam trihelix transcription factor ASIL2 22 88 - -
Mupr8235g00001 322 Coils Coil 179 214 - -
Mupr8235g00001 322 MobiDBLite consensus disorder prediction 183 229 - -
Mupr8235g00001 322 Gene3D - 22 88 - -
Mupr8235g00001 322 MobiDBLite consensus disorder prediction 119 139 - -
Mupr8235g00001 322 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8235g00001 Mupr-Chr8235 17381 22877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8235g00001 18 297 Trihelix Transcription Factor Family AT3G14180 34.463 2.28e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr8235g00001 Myb_DNA-bind_4 1.6e-24 CL0123