Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr821g00002 ATGGATTCAAACACATCAAGCTTTCTTTTGAACTCTTCAACTTTGCACTCAGTTTTCTACCAAGACAAACAGGATGATGGCATAATTGATCTGGGTCTTAGTCTCGGAACTGTTCAACATGAAGCTTATAATTCTTCTGGCAACTGTATGGGTTCACCCCTCCTTCATTCTTTTAATTCTTCATCTCTTCTAATTTTTCATACACCATTTATGTATGATGATGACCTTCTGGATTGGCCTCACTCTAATCTCAATCTCAAGAATTCAAGCACAATGCCTTCTAGATCTGTCCACAAAAATTTTGATGAAGAGACAGAGGGGGTCCAAAGCAACGAGAGATGGGCTTATGTGAAGGTTAACATGGATGGGGTTACCATTGGTAGGAAAATTTGTGTACTTGATCACGGGGGATACTCAAGTCTAGCACACCAATTAGAAAACATGTTTGGTAGGCAGAGAAGCCAATCTGTTTCAGGATTACGATTGTTCCAATCGGGATCAGACTACTCATTGTTCTACAAGGACAGACAAGATAATTGGAGGGTTGTCGGTGATGTACCATGGAAGGAGTTTATAGAATGTGTGAGGCGGTTGAGGATTGCAAGAAAGAATGTGGGCAGTGTTTCATGTTCATCTAGATACACCTAA 648 0.4043 MDSNTSSFLLNSSTLHSVFYQDKQDDGIIDLGLSLGTVQHEAYNSSGNCMGSPLLHSFNSSSLLIFHTPFMYDDDLLDWPHSNLNLKNSSTMPSRSVHKNFDEETEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGYSSLAHQLENMFGRQRSQSVSGLRLFQSGSDYSLFYKDRQDNWRVVGDVPWKEFIECVRRLRIARKNVGSVSCSSRYT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr821g00002 215 ProSiteProfiles PB1 domain profile. 114 205 IPR000270 GO:0005515
Mupr821g00002 215 Pfam AUX/IAA family 87 202 IPR033389 -
Mupr821g00002 215 SUPERFAMILY CAD & PB1 domains 114 201 - -
Mupr821g00002 215 Gene3D - 108 212 - -
Mupr821g00002 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 61 203 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr821g00002 Mupr-Chr821 10559 11775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr821g00002 109 200 B3 DNA Binding Superfamily AT1G19220 35.870 1.45e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr821g00002 AUX_IAA 5.8e-24 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr821g00002 K14484 - gmx:100777024 326.25