Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8219g00003 ATGAGTACAGGAGACAGGCCAAAAATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGGAGAAAGTGTAACAACCTCTCTAAAGGATAACTTTCCTCAAACCCTGCCAGACCCATCACCTATGGTTGTAGGCAACACCACAAACAGCAACAATAGCCTTGAAGAGAATCTCAGACTTTCTGTGGAGGAGCTCTCCTACAACAACCATCACAATCCACAGCATCCAGAAGATGTCTCCACCTATGCAAATGATGGAGTCACTGCCACATCTATTGACATCCCACATCCACAGCATCTAGGTTTGAACATGGGGAACTCCTACAACAACAACAACAACATGGATAACCATTTGGTACAAGAAGTCATTGATGCCCTTCCCTATCAGCACTCCACATGGGACCCTACTATTCAGGAATTACAAGACATGACCTATGCTAATCACACAGACCAACAACAACAACAACCAAATGACCAACAATTTCAGCAAATTGAGACTCAAAACTGCAGCCAAAGCTACAACCCCTCTTCCATACTAGACCCTCCTTACCCTTCACCAGATCTCCTAAACCTTCTCCACTTACCAAGATGCACAACCTCATCTTTGCTCACCAACCCCACCATTTGCCTCACAAACCCAACTCAGAACACACCCAATTTTCAGAATCCAATGGCCTTTCTTGGAGACATTCCAATAGGATCAGACAACACAAGTGTATCCTCAGTTTTGTATGATCCTCTATTCCATCTCAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTCCAGTCCCTCCCCCGTGGCTACAGCTTGCCAACCAACTCCAGGAACGGTTCACTCTTTGGTGGAGGGGATGAGATAGAGGGAGATGGGAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACCTTCTGTTGGCAAAGGAAGGGGAGGGAAAGCCACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAACTCAATGGAAAATACAAAATCTTGAGGAGTCTCATCCCAAACCCCACCAAGATTGATAGAGCATCTGTGGTGGGGGATGCCATTGACTATATAAGAGAGCTTATTAGAACAGTGAATGAGCTCAAACTACTGGTGGAGAAGAAAAGATATGGGAAGGAGAGGTGCAAGAGGCCCAAAACAGAAGAAGATGGTGCTGAGAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCGTGGCTGCAGAGGAAATCCAAAGACAGTGAGGTTGATGTCCGGATCATCGATGATGATGTCACAATCAAACTCTTTCAAAGAAAGAAGATTAACTGCCTGCTGTTTGTCTCAAAGGTTCTAGATGAACTTCAGTTGGAGCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATTGAAGGTTCTTCGGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTCTGGACACTCAGTACGCAGGAGTAGTGCCACATACAAACAGCTATTAG 1545 0.457 MSTGDRPKMHEQTGCFDPNTMGESVTTSLKDNFPQTLPDPSPMVVGNTTNSNNSLEENLRLSVEELSYNNHHNPQHPEDVSTYANDGVTATSIDIPHPQHLGLNMGNSYNNNNNMDNHLVQEVIDALPYQHSTWDPTIQELQDMTYANHTDQQQQQPNDQQFQQIETQNCSQSYNPSSILDPPYPSPDLLNLLHLPRCTTSSLLTNPTICLTNPTQNTPNFQNPMAFLGDIPIGSDNTSVSSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFGGGDEIEGDGSQLDMGVLEFNRVTPSVGKGRGGKATKHFATEKQRREQLNGKYKILRSLIPNPTKIDRASVVGDAIDYIRELIRTVNELKLLVEKKRYGKERCKRPKTEEDGAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVLDTQYAGVVPHTNSY 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8219g00003 514 MobiDBLite consensus disorder prediction 307 327 - -
Mupr8219g00003 514 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 378 IPR036638 GO:0046983
Mupr8219g00003 514 Gene3D - 314 387 IPR036638 GO:0046983
Mupr8219g00003 514 PANTHER TRANSCRIPTION FACTOR BHLH91 8 507 IPR045895 GO:0006355|GO:0048658
Mupr8219g00003 514 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Mupr8219g00003 514 CDD bHLH_AtMYC1_like 321 385 IPR045896 -
Mupr8219g00003 514 SMART finulus 322 371 IPR011598 GO:0046983
Mupr8219g00003 514 MobiDBLite consensus disorder prediction 1 24 - -
Mupr8219g00003 514 Pfam Helix-loop-helix DNA-binding domain 319 365 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8219g00003 Mupr-Chr8219 10059 12074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8219g00003 14 514 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 37.546 4.39e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8219g00003 HLH 8.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8219g00003 - - gmx:100782512 863.218