Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8205g00002 ATGTCCATGTTCTCAACATATCTTTTGAAACCAAGAATCTTAAGTCCTTTGATTAAGGGATCAACCAACATAGAATCTCTTAAATCATCAAGTGCTGCTTTCCACCCAGAGCCATTCCCAGGTTCAAGTTCAAAGAATTTTTCAAGCCTTTCAGGAACTAAGCGGAAGGAACCATCGACAAGAAGTTCTCATCAACAACCATTTCATGAAAGTTTCAATGGTGAAGCTAAGACAGATGACATACACTGCAAAATCTGCCAAATATCTTGCTCAAGTCCATCCAATCTCAAGCAACACTTGAAAGGTCACAAGCACAGGCAAACGGTGCAGAAGGGCAGAAGTAATCAGACGCAATGGTGCGAAGTGTGTAGCGTTCTGTGTATGAATGAAGATCTGCTCAAGCTGCACTTTCAAGGTCAAAAGCACAAGGCTAAATTGCAGATGTTGAAAATTAATAAGGAATATGGAGAGGCTCCCAATAAACCAAGATGGTGTGAATTATGCAAAGTATGGTGCAGTGATGAGTTTTCCTTCAAGCAGCATCTTGAAGGGAAAAAACACATCGTTCAATTGCATGTCATGGAGAAAGAAAAGGAGAGATGA 603 0.4046 MSMFSTYLLKPRILSPLIKGSTNIESLKSSSAAFHPEPFPGSSSKNFSSLSGTKRKEPSTRSSHQQPFHESFNGEAKTDDIHCKICQISCSSPSNLKQHLKGHKHRQTVQKGRSNQTQWCEVCSVLCMNEDLLKLHFQGQKHKAKLQMLKINKEYGEAPNKPRWCELCKVWCSDEFSFKQHLEGKKHIVQLHVMEKEKER 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8205g00002 200 ProSitePatterns Zinc finger C2H2 type domain signature. 83 105 IPR013087 -
Mupr8205g00002 200 MobiDBLite consensus disorder prediction 41 56 - -
Mupr8205g00002 200 MobiDBLite consensus disorder prediction 35 72 - -
Mupr8205g00002 200 Gene3D Classic Zinc Finger 113 158 - -
Mupr8205g00002 200 Gene3D Classic Zinc Finger 70 112 - -
Mupr8205g00002 200 Gene3D Classic Zinc Finger 159 198 - -
Mupr8205g00002 200 PANTHER ZINC FINGER RNA-BINDING PROTEIN 118 192 - -
Mupr8205g00002 200 SUPERFAMILY beta-beta-alpha zinc fingers 156 191 IPR036236 -
Mupr8205g00002 200 SMART ZnF_U1_5 78 112 IPR003604 GO:0003676|GO:0008270
Mupr8205g00002 200 SMART ZnF_U1_5 115 149 IPR003604 GO:0003676|GO:0008270
Mupr8205g00002 200 SMART ZnF_U1_5 160 194 IPR003604 GO:0003676|GO:0008270
Mupr8205g00002 200 Pfam Zinc-finger of C2H2 type 164 187 - -
Mupr8205g00002 200 Pfam Zinc-finger of C2H2 type 119 142 - -
Mupr8205g00002 200 Pfam Zinc-finger of C2H2 type 82 105 - -
Mupr8205g00002 200 SUPERFAMILY beta-beta-alpha zinc fingers 76 111 IPR036236 -
Mupr8205g00002 200 SUPERFAMILY beta-beta-alpha zinc fingers 115 152 IPR036236 -
Mupr8205g00002 200 SMART c2h2final6 81 103 IPR013087 -
Mupr8205g00002 200 SMART c2h2final6 163 187 IPR013087 -
Mupr8205g00002 200 SMART c2h2final6 118 142 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8205g00002 51 187 C2H2 Transcription Factor Family AT5G61190 25.301 4.40e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr8205g00002 zf-met 8.4e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8205g00002 - - ccaj:109791260 239.58