Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8204g00004 ATGTCCGTACACTCAACACTGAAGTTCCACCCCATGAACCTCGCAACCCCAAGTTCCCATTTTGACGACAACCCACCATGCAAAACAACCACCAAAACCCAAAGGAAGCTGCTTCGGATCATCCTCACCGACCACGACGCTACCGATTCTGACTCCGACGACGACGAAGAACAACAAAAAAGCCCAAAAAAGACACCAAGGGTGAAGAGAGAAATCACACTAATAAACATGCACCTTCCTCTCTCAGATAATTCCACTTCTTCTTCTTCTTACACTTATTCTTCTGCTTCTTGCTCCTCACAAAAAGACCCGCCGAACAAGTCCCGGAGACCCAGAAAAGCGCCGCCGTCCTCCGGCCGCGGCAACAAGTTCCGCGGCGTCCGGCAGCGGCCGTGGGGGAGGTGGGCCGCCGAGATCCGCGACCCCACTCGCCGGAAACGCCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCCGCCACCGAGTACGACAAGGCCGCCCTGAAACTCAAAGGCCCCAACGCCGTCACCAACTTCCCCCTCGCTCCTCCACCGCCGGCGTCCCCTGCCATCGCCGTCGATAGCCTGAGCACCGACGGCGGCGCGTCGAATTCCGACTTCGTCGCCTCGCCGACCTCCGTGCTGACTTACAACTGCAACTCGACGCGGTTCGACGATTTCTGTTACGGCAACGTGGACGCGTTCGGGTTCCATATCGACGCGCCGTTAAGTTTGCACGACGCTAACGGTATGCTGACGTGTGATCTCCAGGAGGAGTTCCCGGAATTCGATCTCGACGAGTACATTACATGGCCTTACTAA 822 0.573 MSVHSTLKFHPMNLATPSSHFDDNPPCKTTTKTQRKLLRIILTDHDATDSDSDDDEEQQKSPKKTPRVKREITLINMHLPLSDNSTSSSSYTYSSASCSSQKDPPNKSRRPRKAPPSSGRGNKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTFDTAEEAATEYDKAALKLKGPNAVTNFPLAPPPPASPAIAVDSLSTDGGASNSDFVASPTSVLTYNCNSTRFDDFCYGNVDAFGFHIDAPLSLHDANGMLTCDLQEEFPEFDLDEYITWPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8204g00004 273 CDD AP2 123 179 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 SMART rav1_2 123 186 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 Gene3D AP2/ERF domain 122 182 IPR036955 GO:0003700|GO:0006355
Mupr8204g00004 273 MobiDBLite consensus disorder prediction 56 71 - -
Mupr8204g00004 273 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 199 - -
Mupr8204g00004 273 MobiDBLite consensus disorder prediction 78 104 - -
Mupr8204g00004 273 SUPERFAMILY DNA-binding domain 123 181 IPR016177 GO:0003677
Mupr8204g00004 273 PIRSF PTI6 7 273 IPR017392 GO:0003700
Mupr8204g00004 273 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 FunFam Ethylene-responsive transcription factor 2 122 181 - -
Mupr8204g00004 273 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 ProSiteProfiles AP2/ERF domain profile. 123 180 IPR001471 GO:0003700|GO:0006355
Mupr8204g00004 273 MobiDBLite consensus disorder prediction 44 129 - -
Mupr8204g00004 273 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8204g00004 Mupr-Chr8204 43033 43854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8204g00004 28 219 AP2-EREBP Transcription Factor Family AT4G27950 44.162 7.69e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr8204g00004 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8204g00004 K13434 - gmx:100817278 329.717