Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8195g00008 ATGGCAACAGAAGAGCCCACTGTGGCGGTGGAACCTGCACCCGAACCAGCCTCCGCCGACCCTCCCCCTGAGGAGAAGGAGGAGCCCAAACCTGAGACCAAGTCCAAGAAGACCAAGGAACCTAAACCTAAGAAAGTTTCCAGACCTCGCAACCCTCCCACTCATCCTTCCTATGAAGAGATGATTAAAGAGGCAATTACCTCACTCAAGGAAAAAACTGGTTCCAGCCAATACGCAATTGCGAAGTTCATTGAGGAGAAGCACAAACACCTTCCACCAAACTTCAAGAAACTCTTGCTCTACCACTTGAAGAAGCTTGTTGCTGCTGGAAAACTAGTCAAAGTCAAAGGCTCCTTCAAGCTTCCACCGACCAGACCGGCTGCATCTTCTCCTGCCAAGAAGAAGAAGCCTGCCGCTGCTAAACCCAAGCCTAAGCCCAAGCCGAAGCCCAAGCCTGCTGCCAAGGCCAAGGACACTAAGGTAGCTAAATCAAAAGCACCTGCCAAGCCCAAGCCAGCTGCCAAGCCTAAGGCCAAGGCTCCGGCCAAGTCAAAGCCCGCTGCAAAGACCAAGGCTGCTCCGACTAAGCCCAAGCCTGCTGCTGTCAAGCCCAAAGCCACTAAGCCAGCTGCGAAACCCAAGCCTGCTGCTGCTAAGCCCAAAGCCAAGGCAGTGCCAAAGCCCAAGACTAAACCTGTGAAGGCTGCAAGGACTTCTACGAGGACATCACCAGGAAAGAAAGCTCCTGCCTCTAAGCCAGCTCCAAAGAAAGTGGTGGCTGCAAAGAAAACTCCAGTGAAGAGTGTGAAACCAAAGAGTGTAAAATCTCCAGCGAAAAAGGCTACAGCTAAGAGAGGGGGTAGGAAGTGA 870 0.5253 MATEEPTVAVEPAPEPASADPPPEEKEEPKPETKSKKTKEPKPKKVSRPRNPPTHPSYEEMIKEAITSLKEKTGSSQYAIAKFIEEKHKHLPPNFKKLLLYHLKKLVAAGKLVKVKGSFKLPPTRPAASSPAKKKKPAAAKPKPKPKPKPKPAAKAKDTKVAKSKAPAKPKPAAKPKAKAPAKSKPAAKTKAAPTKPKPAAVKPKATKPAAKPKPAAAKPKAKAVPKPKTKPVKAARTSTRTSPGKKAPASKPAPKKVVAAKKTPVKSVKPKSVKSPAKKATAKRGGRK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 170 184 - -
Mupr8195g00008 289 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 54 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr8195g00008 289 SMART h15plus2 52 118 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 273 289 - -
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 113 289 - -
Mupr8195g00008 289 Gene3D - 50 129 IPR036388 -
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 136 150 - -
Mupr8195g00008 289 CDD H15 52 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 1 58 - -
Mupr8195g00008 289 FunFam Histone H1 49 134 - -
Mupr8195g00008 289 PRINTS Histone H5 signature 41 62 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mupr8195g00008 289 PRINTS Histone H5 signature 68 85 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mupr8195g00008 289 PRINTS Histone H5 signature 110 134 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mupr8195g00008 289 PRINTS Histone H5 signature 179 196 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mupr8195g00008 289 PRINTS Histone H5 signature 145 159 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mupr8195g00008 289 SUPERFAMILY "Winged helix" DNA-binding domain 51 136 IPR036390 -
Mupr8195g00008 289 Pfam linker histone H1 and H5 family 55 121 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr8195g00008 289 PANTHER HISTONE H1 22 260 - -
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 151 165 - -
Mupr8195g00008 289 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8195g00008 Mupr-Chr8195 43351 44346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8195g00008 52 166 Single Myb Histone (SMH) Gene Family AT1G49950 34.400 1.19e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8195g00008 K11275 - gmx:100795994 163.31