Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8193g00002 ATGTACTCTCAAAACCTGATTCTCCCCCCCGAAAACCCTAGACCCGCGGCGTTCGCTTCGAAACCCATGAGCAATGAGATTGCAATCGCCGCGCAGAAGCCTCCGCCGTCAATTCTCGTTGGGCGCTTCAAGGCTCTCATCAAGCAGCGCGACGACGAACTCAGGCTCGCCGGCGCCCCCGTGCCGCCGCCGACCACCGACGAAATCGTGCAGATTTACGAGATGCTCTTGTCGGAACTCACCTGCAATTTGAAACCTATCATCACCGATCTCACCATCATCGCCGAACAGCAGAGGGAGCACGCCAAAGGCATCGCTGACGCAATTTGCGCTCGGATTCTCGAGGTGCAAGCAGATCAGAAGCTTCCTTCACTCTATCTGTTGGACAGTATTGTGAAGAATTTTGGGCAGGAATACATTAGATACTTCTCTTTACGTCTGCCAGAAGTTTTCTGTGAGGCATACAAGCAGGTTCAGCCTAATTTGCATTCTGCTATGCGCCACCTTTTTGGTACTTGGTCAAAAGTTTTTCCACCTTCTGTCCTGCGCAAGATTGAAGCTGAGTTGCAATTTTCTCAAGCAGTTAATACTCAAGCATCCACCCTGAATCCTGTCAGGGCTTCTGAATCTTCTCGACCAAGTCATGGCATACATGTTAATCCAAAATACTTGCGGCAGTTGGAGCGCTCATCTGTGGATAGTGATAGTGGTGAAAAGTTGGATTCATCAGGAAATACTAGTAATACAAACTTTGGCTTTGTACCTAGTAAGACACATCAATTTTTATCAGGCAGTAGCAGGATTGGAATATCCTTGTCCCCTTCAAGAATTGGACTTGATAGGCCTTTGTCTGCATCTTTGGATGAATTTGCAGTTGACAATTCTGCTGGCAGGTCAATTGAGAGAGACTCTCCTCATCTTGCTGTCGATTATGGAATAGCCAAAGCAGTAGGTAGAGGTGTGGAGTTGAGTGAATGGCAGCGAAAGCAGTATTCTGGTGATGGTCGAAATCGATTTCCAACTTCTATTACATACAGCCTTAGTAATGGACATCAGCGTCAAAGTCCAAGAGCTTTAATTGATGCATATGGCAGTGACAAAAGCCAAGAAACTTCAAGCAGTAAACCTTTGTTAGTTGATCGGCTGGATAGAAATGGTATAGAGAGCAAAGTGTTGTCAACATCATGGCAGAATACTGAAGAGGAGGAGTTCGACTGGGAAGATATGAGTCCAACCTTAACAGACCATAGTAGGAATAACAATTTATTGCCTTCAACTATTGGTTTCCCCAGGGAAAGGCCTGTTGTTGCAGCTAATGCAACTTTGTCCGAGCAAGATACCAGGAAGGGTTGGTCTAGTGGATCTCAGCTTCCTCCAGCAGATGATTCTTCTGCTATACCAGAAGATGCATTTGCCTCTTCAGCTTTTCGTCGGGCGCCCCCGGGTCAGGCACCTGGATTTCAAAATCAAATAAACCATAGTCTGGGCTCCTCTCAACCTCATGATGCTTGGAAGATTTCTCTTCATCCATCTAACTCGTCACAACATATCTTTAATAGTAGGGGGCGAGCAAGGAGCCTCACGATCCCACCTATTGATAACATTCGCAATACAGATATAAACCCATATCGGGTTCGACCTGCAGTGTCAAGGATGGTTTCTGGCCTTGTCTCTAATGTGGAAGCTCGTCCATCAGTTTTGCCACCATCTTTTGAAATAAGGTCTTCTGTAAACCTGAATGTCACTCGACCTCCCACCTTAAATCCAATATATCCGTTGCAAAAACATAGTAGGGGTCCGTTTGAAGTAATGCATACTAGTAACCCTATTGTGAACCATGTTGTAAATAAATCTTCGTTTATGCCAGAACAGTCATTTGACAGTGTTGAGAACAAGGATGCGAGTATTTCAAAGATACATCAGTTGCCTAATCAGCTTCCTGGACTAATTTCATCCAACCAGCAACATCACGGGCAAGCACCACAACTACAGTTTTTTCCATCTCAGGATCCATCATCACAATTTAGTCATGGGAGTTCTTTGCAGGGACATGGTGCTTCTATAAGTACAGCCATGTCAAATCCATTACCCGTTATACAATTTCCTTTACCAGTCCAGAGTATTGCAAATAACCCTTTACATTTACAGGGTGGAGCCCATCCACCTTTACCTCCAGGTCGCCCTCCTGCTCCATCTCAAATTCATCCAAATGCTAGTCCATTTATGCCAGGCCAACAGCCAACTGTTGGATATACTAATTTAATTAGTTCTCTGATGTCTCAAGGTGTGATCTCATTAGGTAACCAGCTACCTGCACAGGATTCTGTTGGAACTGAGTTTAATCCAGATATTCTGAAGGTTCGACATGAGTCTGCAGTCAATGCCTTATATGGTGATCTCCCTAGACAATGCACAACTTGTGGGCTCCGATTCAGATGCCAAGAGGAACACAGTAGTCATATGGACTGGCATGTGACTAAGAATCGGATGTCTAAAAGCCGCAAGCAGAAGCCATCTCGCAAGTGGTTTGTGAGTGACAGGATGTGGCTTAGTGGGGCAGAGGCATTGGGAACAGAATCAGTTCCAGGTTTTTTGCCAACAGAAACCATAGAAGAAAGGACAGATCATGAAGAGTTGGCAGTGCCAGCAGAAGAGGACCAGAATACATGTGCACTATGTGGAGAGCCTTTCGATGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATAGAGGAGCTGTATACCTCTATGCACCCACAGAAACAACAGCAGGCATGGACAGGTCACAGTTAGGCCCCATAATTCATGCTAAATGCAGATCAGAATCTAATATGGTTGCCTCTGATGATCTTGGGCTAGATGAGAAGGGTGCCGATGAAGAGGGTACCCAAAGGAAACGAATGCGAAGTTGA 2913 0.4538 MYSQNLILPPENPRPAAFASKPMSNEIAIAAQKPPPSILVGRFKALIKQRDDELRLAGAPVPPPTTDEIVQIYEMLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVQADQKLPSLYLLDSIVKNFGQEYIRYFSLRLPEVFCEAYKQVQPNLHSAMRHLFGTWSKVFPPSVLRKIEAELQFSQAVNTQASTLNPVRASESSRPSHGIHVNPKYLRQLERSSVDSDSGEKLDSSGNTSNTNFGFVPSKTHQFLSGSSRIGISLSPSRIGLDRPLSASLDEFAVDNSAGRSIERDSPHLAVDYGIAKAVGRGVELSEWQRKQYSGDGRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSSKPLLVDRLDRNGIESKVLSTSWQNTEEEEFDWEDMSPTLTDHSRNNNLLPSTIGFPRERPVVAANATLSEQDTRKGWSSGSQLPPADDSSAIPEDAFASSAFRRAPPGQAPGFQNQINHSLGSSQPHDAWKISLHPSNSSQHIFNSRGRARSLTIPPIDNIRNTDINPYRVRPAVSRMVSGLVSNVEARPSVLPPSFEIRSSVNLNVTRPPTLNPIYPLQKHSRGPFEVMHTSNPIVNHVVNKSSFMPEQSFDSVENKDASISKIHQLPNQLPGLISSNQQHHGQAPQLQFFPSQDPSSQFSHGSSLQGHGASISTAMSNPLPVIQFPLPVQSIANNPLHLQGGAHPPLPPGRPPAPSQIHPNASPFMPGQQPTVGYTNLISSLMSQGVISLGNQLPAQDSVGTEFNPDILKVRHESAVNALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSDRMWLSGAEALGTESVPGFLPTETIEERTDHEELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMYRGAVYLYAPTETTAGMDRSQLGPIIHAKCRSESNMVASDDLGLDEKGADEEGTQRKRMRS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 337 357 - -
Mupr8193g00002 970 Pfam CID domain 83 184 IPR006569 -
Mupr8193g00002 970 CDD CID_Pcf11 73 190 IPR047415 -
Mupr8193g00002 970 ProSiteProfiles CID domain profile. 65 193 IPR006569 -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 444 460 - -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 946 970 - -
Mupr8193g00002 970 ProSitePatterns Zinc finger C2H2 type domain signature. 804 824 IPR013087 -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 650 688 - -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 444 463 - -
Mupr8193g00002 970 SMART 558neu5 68 190 IPR006569 -
Mupr8193g00002 970 FunFam polyadenylation and cleavage factor homolog 4 62 190 - -
Mupr8193g00002 970 Gene3D - 63 191 IPR008942 -
Mupr8193g00002 970 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 54 956 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 237 252 - -
Mupr8193g00002 970 SUPERFAMILY ENTH/VHS domain 65 190 IPR008942 -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 228 252 - -
Mupr8193g00002 970 MobiDBLite consensus disorder prediction 337 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8193g00002 Mupr-Chr8193 18274 24977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8193g00002 39 970 C2H2 Transcription Factor Family AT4G04885 43.584 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8193g00002 K14400 - gmx:100794796 1600.1